Job Description P00946 Confidence 98.09% Date Thu Jan 5 10:57:17 GMT 2012 Rank 19 Aligned Residues 144 % Identity 12% Template c3bu7A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:gentisate 1,2-dioxygenase; PDBTitle: crystal structure and biochemical characterization of gdosp,2 a gentisate 1,2-dioxygenase from silicibacter pomeroyi Resolution 2.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.			.	270		.	.	.	.	.
Predicted Secondary structure																																		.	.			.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																		.	.			.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	V	V	K	L	N	P	G	E	A	M	F	L	F	A	E	T	P	H	A	Y	L	Q	G	V	A	L	E	V	M	A	N	.	.	S	D	.	N	V	L	R	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																		.	.			.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.				.	.			.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.
Template Sequence		H	K	V	E	L	G	A	N	D	F	V	L	T	P	N	G	T	W	H	E	.	.	.	.	.	.	.	.	.	H	G	I	L	E	S	G	T	E	C	I	W	Q	D	G	L	D	I	P	L	T	N	C	L	E	A	N	F	Y	E	V	H	P	N	D	Y	Q	T	T	D	I	P	L	N	D	S	P	L	T	Y	G
Template Known Secondary structure								T	T							T	T					.	.	.	.	.	.	.	.	.					T	T																		T	T								T	T	S	S							T	T
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.
Template SS confidence
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.										.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
																				276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	L	T	P	K	Y	I	D	I	P	E	L	V	A	N	V	K	F	E	A	K	P	A	N	Q	L	L	T	Q	P	V	K	Q	G	A	E	L	D	F	P	I	P	V	D	D	F	A	F	S	L	H	D	L	S	D	K	E	T	T	I	S	Q
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	P	A	L	L	P	Q	L	D	K	W	D	K	P	Y	S	P	L	L	K	Y	S	W	E	P	T	Y	E	A	L	L	N	Y	A	K	A	S	D	G	S	P	Y	D	G	L	I	L	R	Y	T	N	P	Q	T	G	G	H	P	M	L	T	M	G	A	S	M	Q	M	L	R	P	G	E	H	T	K	A	H	R	H
Template Known Secondary structure		S	T	T				S	S						S	S		S																		T	T				B	T	T	T	B								T	T	T	S	S		S	S	S	S										T	T		B
Template Predicted Secondary structure
Template SS confidence
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
		338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.		.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																					.
Query SS confidence																																					.
Query Sequence		Q	S	A	A	I	L	F	C	V	E	G	D	A	T	L	W	K	G	S	Q	Q	L	Q	L	K	P	G	E	S	A	F	I	A	A	N	.	E	S	P	V	T	V	K	G	H	G	R	L	A	R	V	Y	N
Query Conservation																																					.
Alig confidence																																					.
Template Conservation
Template Sequence		T	G	N	V	I	Y	N	V	A	K	G	Q	G	Y	S	I	V	G	G	K	R	F	D	W	S	E	H	D	I	F	C	V	P	A	W	T	W	H	E	H	C	N	T	Q	E	R	D	D	A	C	L	F	S
Template Known Secondary structure		S	S																T	T							T	T							T	T										S	S
Template Predicted Secondary structure
Template SS confidence
		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions