|   |
239 | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | |
|
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|
. | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | |
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. | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | |
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|
Predicted Secondary structure |   |
 |  |
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|  |  |  |  |
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|  |  | . | . | . | . | . |  |
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|  |  |  |  |  |
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|  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |
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|  |  |  |  |  |  |  |
| . | . | . | . | . | . |
Query SS confidence |   |
|
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|
| . |
. |
. |
. |
. |
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| . |
. |
. |
. |
. |
. |
. |
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. |
. |
. |
. |
. |
. |
. |
. |
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| . |
. |
. |
. |
. |
. |
Query Sequence |   |
V | K | L | N | P | G | E | A | M | F | L | F | A | E | T | P | H | . |
. |
. |
. |
. |
A | Y | L | Q | G | V | A | L | E | V | M | A | N | S | D | N | V | L | R | . |
. |
. |
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A | G | L | T | P | K | Y | I | D | I | P | E | L | V | A | N | V | . |
. |
. |
. |
. |
. |
Query Conservation |   |
|   |
|   |
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|   |
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|   |
| . | . | . | . | . |
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|   |   |
|   |   |
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|   |   |
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|   |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |
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|   |
|   |   |
|   |   |   |   |
|   |   |
| . | . | . | . | . | . |
Alig confidence |   |
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| . | . | . | . | . |
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| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
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| . | . | . | . | . | . |
Template Conservation |   |
|   |
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|   |
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|   |   |
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|   |   |
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|   |
|   |   |   |
|   |
|   |
|   |
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|   |   |
|   |   |   |
|   |
|   |   |
|   |   |   |
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|   |   |
|
|   |
|   |
|   |   |
|   |   |
|
|
|   |
Template Sequence |   |
V | V | I | R | Q | G | E | I | F | L | L | P | A | R | V | P | H | S | P | Q | R | F | A | N | T | V | G | L | V | V | E | R | R | R | L | E | T | E | L | D | G | L | R | Y | Y | V | G | D | T | X | D | V | L | F | E | K | W | F | Y | C | K | D | L | G | T | Q | L | A | P | I | I | Q | E | F | F | S | S | E | Q | Y |
Template Known Secondary structure |   |
 |  |  |
| T | T |  |  |  |  |  |
| T | T |
|
|  |  |  |  |  |
| T | T |
|  |  |  |  |  |  |  |
|
|
| T | T |
|
|  |  |  |  |  |  | S | T | T | S | S | S |  |  |  |  |  |  |  |
|
| S | S |  |  |  |  |  |  |  |  |  |  |  |  |  | T | S |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |
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|  |  |  |  |
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|  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
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|  |
Template SS confidence |   |
|
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  |   |
75 | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . |
  |
  |   |
|
292 | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | |
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. | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | |
. | . | . |
Predicted Secondary structure |   |
. |
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| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |
|
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|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
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|
|  |  |  |  | . |  |  |
|
Query SS confidence |   |
. |
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| . |
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| . |
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|
Query Sequence |   |
. |
K | F | E | A | K | P | A | N | Q | L | L | T | Q | P | V | K | Q | G | A | . |
. |
. |
. |
. |
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. |
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. |
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. |
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. |
E | L | D | F | P | I | P | V | D | D | F | A | F | S | L | H | D | L | S | D | K | E | T | T | I | S | Q | Q | S | A | A | I | L | F | . |
C | V | E |
Query Conservation |   |
. |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   | . |
|   |   |
Alig confidence |   |
. |
|
|
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|
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|
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|
|
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|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
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|
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|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
Template Conservation |   |
|
|   |
|
|   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |
|
|   |
|   |
|
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|   |   |   |   |   |
|   |   |   |
|   |
|
|   |   |   |   |   |   |   |   |
|   |
|   |
|
|
|
|
Template Sequence |   |
R | T | G | K | P | I | P | D | Q | L | L | K | E | P | P | F | P | L | S | T | R | S | I | X | E | P | X | S | L | D | A | W | L | D | S | H | H | R | E | L | Q | A | G | T | P | L | S | L | F | G | D | T | Y | E | T | Q | V | I | A | Y | G | Q | G | S | S | E | G | L | R | Q | N | V | D | V | W | L | W | Q | L | E |
Template Known Secondary structure |   |
 |  | S |
|
|
| G | G | G | S |
| S | S |
| S | S |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  | T |  |  |  |  |  | T | T |
|
|  |  | S | S |
| T | T | S | S |  |  |  |  |  |  |
| S |  |  |  |  |  |
|
|
| S | S |
|  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
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|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
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|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
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|
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|
|
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|
  |   |
155 | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . |
  |
  |   |
348 | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
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|
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|
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|
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|
|
Query Sequence |   |
G | D | A | T | L | W | K | G | S | Q | Q | L | Q | L | K | P | G | E | S | A | F | I | A | A | N | E | S | P | V | T | V | K | G | H | G | R | L | A | R | V |
Query Conservation |   |
|   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |
|
|
|   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |
Alig confidence |   |
|
|
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|
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|
|
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|
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|
|
Template Conservation |   |
|   |
|   |
|   |   |   |   |   |   |   |   |
|   |   |   |
|   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |
Template Sequence |   |
G | S | S | V | V | T | X | G | G | R | R | L | S | L | A | P | D | D | S | L | L | V | L | A | G | T | S | Y | A | W | E | R | T | Q | G | S | V | A | L | S |
Template Known Secondary structure |   |
S |
|  |  |  |  |  | T | T |  |  |  |  |  |
| T | T |  |  |  |  |  |
| T | T |
|
|  |  |  |  |  |
| T | T |
|  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
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|
|
|
|
|
  |   |
235 | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . |
  |