Job Description P00946 Confidence 97.72% Date Thu Jan 5 10:57:17 GMT 2012 Rank 30 Aligned Residues 161 % Identity 22% Template c1uijA_ PDB info PDB header:sugar binding protein Chain: A: PDB Molecule:beta subunit of beta conglycinin; PDBTitle: crystal structure of soybean beta-conglycinin beta2 homotrimer (i122m/k124w) Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.		260	.								.	.	.	.	.	.	.	.	270	.	.	.										.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure																																		.			.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.
Query SS confidence																																		.			.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.
Query Sequence		S	G	L	F	S	P	L	L	L	N	V	V	K	L	N	P	G	E	A	M	F	L	F	A	E	T	P	H	A	Y	L	Q	.	G	V	.	.	.	.	.	.	.	A	L	E	V	M	A	N	S	D	N	V	L	.	.	.	.	.	.	.	.	.	R	A	G	L	T	P	K	Y	I	D	I	P	E	L	V	A	N
Query Conservation																																		.			.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.
Alig confidence																																		.			.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	T	L	V	N	N	D	D	R	D	S	Y	N	L	H	P	G	D	A	Q	R	I	P	A	G	T	T	Y	Y	L	V	N	P	H	D	H	Q	N	L	K	M	I	W	L	A	I	P	V	N	K	P	G	R	Y	D	D	F	F	L	S	S	T	Q	A	Q	Q	S	Y	L	Q	G	F	S	H	N	I	L	E	T	S
Template Known Secondary structure							S	S									T	T							T	T										S	S												S	S	B	T	T	B						S	S		B	S	S				G	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		291	.	.	.	.	.	.	.	.	300	.																																																		.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Query Sequence		V	K	F	E	A	K	P	A	N	Q	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	T	Q	P	V	K	Q	G	A	E	L	D	F	P	I	P	V	D	D	.
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Template Conservation
Template Sequence		F	H	S	E	F	E	E	I	N	R	V	L	F	G	E	E	E	E	Q	R	Q	Q	E	G	V	I	V	E	L	S	K	E	Q	I	R	Q	L	S	R	R	A	K	S	S	S	R	K	T	I	S	S	E	D	E	P	F	N	L	R	S	R	N	P	I	Y	S	N	N	F	G	K	F	F	E	I	T	P	E	K	N
Template Known Secondary structure			T	S										T		T	T		G	G	G	S	B	S	S	S													T	S	S		B				G	G	G	G	G		S	S	S				T	T	S	S			S				S	S								T	T	T
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
									321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.				.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.					.	.	.	.	.	.				360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.																		.	.	.																	.	.	.	.							.	.	.
Query SS confidence		.	.	.	.	.	.	.																		.	.	.																	.	.	.	.							.	.	.
Query Sequence		.	.	.	.	.	.	.	F	A	F	S	L	H	D	L	S	D	K	E	T	T	I	S	Q	.	.	.	Q	S	A	A	I	L	F	C	V	E	G	D	A	T	L	W	.	.	.	.	K	G	S	Q	Q	L	.	.	.	Q	L	K	P	G	E	S	A	F	I	A	A	N	E	S	P	V	T	V	K	G	H	G	R
Query Conservation		.	.	.	.	.	.	.																		.	.	.																	.	.	.	.							.	.	.
Alig confidence		.	.	.	.	.	.	.																		.	.	.																	.	.	.	.							.	.	.
Template Conservation
Template Sequence		P	Q	L	R	D	L	D	I	F	L	S	S	V	D	I	N	E	G	A	L	L	L	P	H	F	N	S	K	A	I	V	I	L	V	I	N	E	G	D	A	N	I	E	L	V	G	I	K	L	E	V	Q	R	Y	R	A	E	L	S	E	D	D	V	F	V	I	P	A	A	Y	P	F	V	V	N	A	T	S	N	L
Template Known Secondary structure								T										T	T									S	S										S																						T	T							T	T								S	S	S
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
		384	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	R	V	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	F	L	A	F
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		334	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions