Job Description P0AG18 Confidence 47.96% Date Thu Jan 5 11:27:51 GMT 2012 Rank 178 Aligned Residues 136 % Identity 14% Template d8abpa_ SCOP info Periplasmic binding protein-like I Periplasmic binding protein-like I L-arabinose binding protein-like Resolution 1.49

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20				.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																.	.	.
Query SS confidence																.	.	.
Query Sequence		P	A	R	V	A	I	V	M	G	S	K	S	D	W	.	.	.	A	T	M	Q	F	A	A	E	I	F	E	I	L	N	V	P	H	H	V	E	V	V	S	A	H	R	T	P	D	K	L	F	S	F	A	E	S	A	E	E	N	G	Y	Q	V	I	I	A	G	A	G	G	A	A	H	L	P	G	M	I	A	A	K
Query Conservation																.	.	.
Alig confidence																.	.	.															.	.										.
Template Conservation																																	.	.										.
Template Sequence		N	L	K	L	G	F	L	V	K	Q	P	E	E	P	W	F	Q	T	E	W	K	F	A	D	K	A	G	K	D	L	G	.	.	F	E	V	I	K	I	A	V	P	.	D	G	E	K	T	L	N	A	I	D	S	L	A	A	S	G	A	K	G	F	V	I	C	T	P	D	P	K	L	G	S	A	I	V	A	K	A
Template Known Secondary structure										S		T	T	S																		T	.	.										.	S														T	T									S		G	G	G
Template Predicted Secondary structure																																	.	.										.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.			.	.	.	.	.	.	.	40	.		.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		84			.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.																					.	.	140	.
Predicted Secondary structure			.	.																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence			.	.																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	.	.	L	V	P	V	L	G	V	P	V	Q	S	A	A	L	S	G	V	D	S	L	Y	S	I	V	Q	M	P	R	G	I	P	V	G	T	L	A	I	G	K	A	G	A	A	N	A	A	L	L	A	A	Q	I	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	T	H	D
Query Conservation			.	.																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence			.	.																.	.	.	.	.	.	.	.	.	.													.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.													.	.	.
Template Sequence		R	G	Y	D	M	K	V	I	A	V	D	D	Q	F	V	N	A	K	.	.	.	.	.	.	.	.	.	.	G	K	P	M	D	T	V	P	L	V	M	L	.	.	.	A	A	T	K	I	G	E	R	Q	G	Q	E	L	Y	K	E	M	Q	K	R	G	W	D	V	K	E	S	A	V	M	A	I	T	A	N	E	L
Template Known Secondary structure				T	T							S	S			B		T	T	.	.	.	.	.	.	.	.	.	.	S		B		T	T	S						.	.	.																					T			G	G	G									T	T	S
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.													.	.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.											.	.	.	100	.	.	.	.	.	.	.	.				.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	E	L	H	Q	R	L	N	D	W	R	K	A	Q	T	D	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	T	A	R	R	R	T	T	G	S	M	D	A	L	K	A	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions