Job Description P0AG18 Confidence 88.81% Date Thu Jan 5 11:27:51 GMT 2012 Rank 45 Aligned Residues 88 % Identity 15% Template c3rotA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:abc sugar transporter, periplasmic sugar binding protein; PDBTitle: crystal structure of abc sugar transporter (periplasmic sugar binding2 protein) from legionella pneumophila Resolution 1.91 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.				20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure															.	.	.
Query SS confidence															.	.	.
Query Sequence		P	A	R	V	A	I	V	M	G	S	K	S	D	.	.	.	W	A	T	M	Q	F	A	A	E	I	F	E	I	L	N	V	P	H	H	V	E	V	V	S	A	H	R	T	P	D	K	L	F	S	F	A	E	S	A	E	E	N	G	Y	Q	V	I	I	A	G	A	G	G	A	A	H	L	P	G	M	I	A	A	K
Query Conservation															.	.	.
Alig confidence															.	.	.
Template Conservation
Template Sequence		R	D	K	Y	Y	L	I	T	H	G	S	Q	D	P	Y	W	T	S	L	F	Q	G	A	K	K	A	A	E	E	L	K	V	D	L	Q	I	L	A	P	P	G	A	N	D	V	P	K	Q	V	Q	F	I	E	S	A	L	A	T	Y	P	S	G	I	A	T	T	I	P	S	D	T	A	F	S	K	S	L	Q	R	A
Template Known Secondary structure										S				S																		T									S	S	S																T			S									S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
		84	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	V	P	V	L	G	V	P	V	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	K	L	N	I	P	V	I	A	V	D
Template Known Secondary structure					T							S
Template Predicted Secondary structure
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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