Return to main results Retrieve Phyre Job Id

Job DescriptionP0AG18
Confidence37.59%DateThu Jan 5 11:27:51 GMT 2012
Rank226Aligned Residues86
% Identity13%Templatec3komB_
PDB info PDB header:transferaseChain: B: PDB Molecule:transketolase; PDBTitle: crystal structure of apo transketolase from francisella tularensis
Resolution1.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50 .........60.........70.........80..
Predicted Secondary structure 

















.







Query SS confidence 














































.































Query Sequence  RNNPARVAIVMGSKSDWATMQFAAEIFEILNVPHHVEVVSAHRTPDK. LFSFAESAEENGYQVIIAGAGGAAHLPGMIAA
Query Conservation        
 

 

 


     
   

  

  

 
 



 
  .
             



 

  







 
Alig confidence 












.
































.































Template Conservation       

 

  
.  
  

 

  
   

   

     



                 



             
Template Sequence  DNPDAKLTIVATG. SEVELAVKVANEFEKKGIKLNVASIPCVEVFATQAHEYKKTVIKDDIPAVFVEXAQPDXWYKYXPK
Template Known Secondary structure 

TT



T.TTT



S
TS
TTTTS

SS

GGGGGG

T
Template Predicted Secondary structure 







.
























Template SS confidence 















































































   546...550........ .560.........570.........580.........590.........600.........610.........620....
 
   83......90.
Predicted Secondary structure 




Query SS confidence 








Query Sequence  KTLVPVLGV
Query Conservation   
  




Alig confidence 

.





Template Conservation    .    

Template Sequence  AG. GEVKGI
Template Known Secondary structure  T
.

Template Predicted Secondary structure 

.
Template SS confidence 








   625. ...630..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions