Return to main results Retrieve Phyre Job Id

Job DescriptionP0AG18
Confidence44.77%DateThu Jan 5 11:27:51 GMT 2012
Rank188Aligned Residues81
% Identity15%Templatec3hfrA_
PDB info PDB header:isomeraseChain: A: PDB Molecule:glutamate racemase; PDBTitle: crystal structure of glutamate racemase from listeria monocytogenes
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30 .........40.........50....... ..60.........70
Predicted Secondary structure 









.........







....



Query SS confidence 


























. . . . . . . . .


























. . . .












Query Sequence  RNNPARVAIVMGSKSDWATMQFAAEIF. . . . . . . . . EILNVPHHVEVVSAHRTPDKLFSFAES. . . . AEENGYQVIIAGA
Query Conservation        
 

 

 


     
   
.........
  

  

 
 



 
  
      ....       



 
Alig confidence 




.




















.........






......













....












Template Conservation      
.












   
    
    

  
    

......
 

   
          
   
   




Template Sequence  AXKQA. IGFIDSGVGGLTVVREVLKQLPHEQVYYLGDTARCPY. . . . . . GPRDKEEVAKFTWEXTNFLVDRGIKXLVIAC
Template Known Secondary structure 



.SSSTT
TT


GGG


......TTS


S
Template Predicted Secondary structure 




.















......









Template SS confidence 















































































   0.... .....10.........20.........30.........40. ........50.........60.........70..
 
   71...... ..80.........90.
Predicted Secondary structure 



.




Query SS confidence 






.













Query Sequence  GGAAHLP. GMIAAKTLVPVLGV
Query Conservation 
  



.



  
  




Alig confidence 






.













Template Conservation 



  


 

    





Template Sequence  NTATAAALYDIREKLDIPVIGV
Template Known Secondary structure 
SS
S
Template Predicted Secondary structure 








Template SS confidence 





















   73......80.........90....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions