Job Description P0AG18 Confidence 69.06% Date Thu Jan 5 11:27:51 GMT 2012 Rank 92 Aligned Residues 131 % Identity 15% Template c3h75A_ PDB info PDB header:sugar binding protein Chain: A: PDB Molecule:periplasmic sugar-binding domain protein; PDBTitle: crystal structure of a periplasmic sugar-binding protein from the2 pseudomonas fluorescens Resolution 1.60 Å

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		8	.	10	.	.	.	.	.	.	.	.	.					20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure														.	.	.	.																																																														.	.	.
Query SS confidence														.	.	.	.																																																														.	.	.
Query Sequence		A	R	V	A	I	V	M	G	S	K	S	D	.	.	.	.	W	A	T	M	Q	F	A	A	E	I	F	E	I	L	N	V	P	H	H	V	E	V	V	S	A	H	R	T	P	D	K	L	F	S	F	A	E	S	A	E	E	N	G	Y	Q	V	I	I	A	G	A	G	G	A	A	H	L	P	G	M	I	.	.	.
Query Conservation														.	.	.	.																																																														.	.	.
Alig confidence														.	.	.	.																					.	.																																								.	.	.
Template Conservation																																						.	.
Template Sequence		T	S	V	V	F	L	N	P	G	N	S	T	E	T	F	W	V	S	Y	S	Q	F	X	Q	A	A	A	R	D	L	G	L	D	L	R	I	.	.	L	Y	A	E	R	D	P	Q	N	T	L	Q	Q	A	R	E	L	F	Q	G	R	D	K	P	D	Y	L	X	L	V	N	E	Q	Y	V	A	P	Q	I	L	R	L
Template Known Secondary structure										S		T	T																			T						.	.				T	T															S	S	S			S								S	S
Template Predicted Secondary structure																																						.	.
Template SS confidence
		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.			.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.																					.	140
Predicted Secondary structure																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	A	K	T	L	V	P	V	L	G	V	P	V	Q	S	A	A	L	S	G	V	D	S	L	Y	S	I	V	Q	M	P	R	G	I	P	V	G	T	L	A	I	G	K	A	G	A	A	N	A	A	L	L	A	A	Q	I	L	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	H
Query Conservation																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.
Template Sequence		S	Q	G	S	G	I	K	L	F	I	V	N	S	P	L	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	D	Q	R	W	I	G	S	X	V	G	.	.	.	D	D	E	E	A	G	Y	R	X	L	K	E	L	L	H	K	L	G	P	V	P	A	G	H	G	I	E	L	L	A	F	S	G	L	K	V
Template Known Secondary structure			T	T	S									S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T									.	.	.																						S	S										S		T	T
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.															.	.	.	.	150	.	.	.	.	.	.				.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	K	E	L	H	Q	R	L	N	D	W	R	K	A	Q	T	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	P	A	A	Q	L	R	E	R	G	L	R	R	A	L	A	E
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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