Job Description P0AG18 Confidence 31.29% Date Thu Jan 5 11:27:51 GMT 2012 Rank 279 Aligned Residues 108 % Identity 13% Template c3e3mA_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcriptional regulator, laci family; PDBTitle: crystal structure of a laci family transcriptional2 regulator from silicibacter pomeroyi Resolution 1.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		9	10	.	.	.	.	.	.	.	.	.				20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure													.	.	.
Query SS confidence													.	.	.
Query Sequence		R	V	A	I	V	M	G	S	K	S	D	.	.	.	W	A	T	M	Q	F	A	A	E	I	F	E	I	L	N	V	P	H	H	V	E	V	V	S	A	H	R	T	P	D	K	L	F	S	F	A	E	S	A	E	E	N	G	Y	Q	V	I	I	A	G	A	G	G	A	A	H	L	P	G	M	I	A	A	K	T	L
Query Conservation													.	.	.
Alig confidence													.	.	.																.	.
Template Conservation																															.	.
Template Sequence		F	V	G	L	L	L	P	S	L	N	N	L	H	F	A	Q	T	A	Q	S	L	T	D	V	L	E	Q	G	G	.	.	L	Q	L	L	L	G	Y	T	A	Y	S	P	E	R	E	E	Q	L	V	E	T	M	L	R	R	R	P	E	A	M	V	L	S	Y	D	G	H	T	E	Q	T	I	R	L	L	Q	R	A	S
Template Known Secondary structure								S		S	S																		T	T	.	.									T	T															T			S							S
Template Predicted Secondary structure																															.	.
Template SS confidence
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.			.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	P	V	L	G	V	P	V	Q	S	A	A	L	S	G	V	D	S	L	Y	S	I	V	Q	M	P	R	G	I	P	V	G	T	L	A	I	G	K	A	G	A	A	N	A	A	L	L	A	A	Q	I	L
Query Conservation
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.
Template Sequence		I	P	I	V	E	I	W	E	K	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	H	P	I	G	H	T	V	G	F	.	.	.	S	N	E	R	A	A	Y	D	M	T	N	A	L
Template Known Secondary structure		S						S	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S		S	S						.	.	.
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.
Template SS confidence
		148	.	150	.	.	.	.	.	.	.																	.	.	160	.	.	.	.	.	.	.				.	.	170	.	.	.	.	.	.	.	.	.	180

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions