Job Description P0AG18 Confidence 29.02% Date Thu Jan 5 11:27:51 GMT 2012 Rank 297 Aligned Residues 98 % Identity 16% Template c3dufD_ PDB info PDB header:oxidoreductase/transferase Chain: D: PDB Molecule:pyruvate dehydrogenase e1 component subunit beta; PDBTitle: snapshots of catalysis in the e1 subunit of the pyruvate2 dehydrogenase multi-enzyme complex Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		N	P	A	R	V	A	I	V	M	G	S	K	S	D	W	A	T	M	Q	F	A	A	E	I	F	E	I	L	N	V	P	H	H	V	E	V	V	S	A	H	R	T	P	D	K	L	F	S	F	A	E	S	A	E	E	N	G	Y	Q	V	I	I	A	G	A	G	G	A	A	H	L	P	G	M	I	A	A	K	T	.
Query Conservation																																																																																	.
Alig confidence															.																															.																																			.
Template Conservation															.																															.
Template Sequence		E	G	K	D	I	T	I	I	A	Y	G	A	M	.	V	H	E	S	L	K	A	A	A	E	L	E	K	E	G	I	S	A	E	V	V	D	L	R	T	V	Q	P	L	D	.	I	E	T	I	I	G	S	V	E	K	T	G	R	A	I	V	V	Q	E	A	Q	R	Q	A	G	I	A	A	N	V	V	A	E	I	N
Template Known Secondary structure				S	S							T	T		.													T	T	T									S				S			.												S										T	T	S	S	S
Template Predicted Secondary structure															.																															.
Template SS confidence
		200	.	.	.	.	.	.	.	.	.	210	.	.		.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.		.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
									85	.	.	.			.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.					.	.
Query SS confidence		.	.	.	.	.	.	.					.	.
Query Sequence		.	.	.	.	.	.	.	L	V	P	V	.	.	L	G	V	P	V	Q	S	A	A	L	S	G	V	D	S	L	Y
Query Conservation		.	.	.	.	.	.	.					.	.
Alig confidence		.	.	.	.	.	.	.					.	.
Template Conservation
Template Sequence		E	R	A	I	L	S	L	E	A	P	V	L	R	V	A	A	P	D	T	V	Y	P	F	A	Q	A	E	S	V	W
Template Known Secondary structure					G	G	G		S	S									S	S	S				G	G	G
Template Predicted Secondary structure
Template SS confidence
		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions