Job Description P0AG18 Confidence 54.75% Date Thu Jan 5 11:27:51 GMT 2012 Rank 142 Aligned Residues 145 % Identity 16% Template c2q62A_ PDB info PDB header:flavoprotein Chain: A: PDB Molecule:arsh; PDBTitle: crystal structure of arsh from sinorhizobium meliloti Resolution 1.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		5	.	.	.	.	10	.	.	.	.	.	.	.	.					.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40								.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.				70
Predicted Secondary structure																.	.	.	.																							.	.	.	.	.	.	.																														.	.	.
Query SS confidence																.	.	.	.																							.	.	.	.	.	.	.																														.	.	.
Query Sequence		N	N	P	A	R	V	A	I	V	M	G	S	K	S	.	.	.	.	D	W	A	T	M	Q	F	A	A	E	I	F	E	I	L	N	V	P	H	H	V	E	.	.	.	.	.	.	.	V	V	S	A	H	R	T	P	D	K	L	F	S	F	A	E	S	A	E	E	N	G	Y	Q	V	I	I	A	G	.	.	.	A
Query Conservation																.	.	.	.																							.	.	.	.	.	.	.																														.	.	.
Alig confidence																.	.	.	.																							.	.	.	.	.	.	.																														.	.	.
Template Conservation
Template Sequence		T	H	R	P	R	I	L	I	L	Y	G	S	L	R	T	V	S	Y	S	R	L	L	A	E	E	A	R	R	L	L	E	F	F	G	A	E	V	K	V	F	D	P	S	G	L	P	L	P	D	A	A	P	V	S	H	P	K	V	Q	E	L	R	E	L	S	I	W	S	E	G	Q	V	W	V	S	P	E	R	H	G
Template Known Secondary structure			S													S	S																	T	T									T	T				T	T	S	S		T	T	S														S									S	S	S
Template Predicted Secondary structure
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
		71	.	.	.	.	.	.	.	.	80	.	.											.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100			.	.	.	.	.	.	.	.	.							110	.	.	.	.	.	.	.	.	.	120	.	.	.		.	.	.	.	.	.	130	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.																			.	.										.	.	.	.	.	.															.
Query SS confidence														.	.	.	.	.	.	.	.	.	.																			.	.										.	.	.	.	.	.															.
Query Sequence		G	G	A	A	H	L	P	G	M	I	A	A	.	.	.	.	.	.	.	.	.	.	K	T	L	V	P	V	L	G	V	P	V	Q	S	A	A	L	S	G	.	.	V	D	S	L	Y	S	I	V	Q	.	.	.	.	.	.	M	P	R	G	I	P	V	G	T	L	A	I	G	K	.	A	G	A	A	N	A	A	L
Query Conservation														.	.	.	.	.	.	.	.	.	.																			.	.										.	.	.	.	.	.															.
Alig confidence														.	.	.	.	.	.	.	.	.	.																			.	.										.	.	.	.	.	.															.					.	.	.	.
Template Conservation																																																																														.	.	.	.
Template Sequence		A	M	T	G	I	M	K	A	Q	I	D	W	I	P	L	S	T	G	S	I	R	P	T	Q	G	K	T	L	A	V	M	Q	V	S	G	G	S	Q	S	F	N	A	V	N	Q	M	R	I	L	G	R	W	M	R	M	I	T	I	P	N	Q	S	S	V	A	K	A	F	Q	E	F	D	A	N	G	R	.	.	.	.
Template Known Secondary structure		S											T	S		S		B	T	T	B		S	S	T	T										S	S	S																T	T					S						S	S	G	G	G	G	B		T	T	S		.	.	.	.
Template Predicted Secondary structure																																																																														.	.	.	.
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	A	Q	I	L	A	T	H	D	K	E	L	H	Q	R	L	N	D	W	R	K	A	Q	T	D	E	V	L
Query Conservation
Alig confidence		.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	M	K	P	S	S	Y	Y	D	R	V	V	D	V	M	E	E	L	V	K	F	T	L
Template Known Secondary structure		.	.	.	.	.	.	.	B		S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.
Template SS confidence
									188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions