Job Description P0AG18 Confidence 92.76% Date Thu Jan 5 11:27:51 GMT 2012 Rank 36 Aligned Residues 117 % Identity 14% Template c2pjuD_ PDB info PDB header:transcription Chain: D: PDB Molecule:propionate catabolism operon regulatory protein; PDBTitle: crystal structure of propionate catabolism operon2 regulatory protein prpr Resolution 2.10 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.		.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure																																																								.
Query SS confidence																																																								.
Query Sequence		R	V	A	I	V	M	G	S	K	S	D	W	A	T	M	Q	F	A	A	E	I	F	E	I	L	N	V	P	H	H	V	E	V	V	S	A	H	R	T	P	D	K	L	F	S	F	A	E	S	A	E	E	N	G	.	Y	Q	V	I	I	A	G	A	G	G	A	A	H	L	P	G	M	I	A	A	K	T	L	V	P
Query Conservation																																																								.
Alig confidence														.	.																			.	.																					.										.	.	.	.
Template Conservation														.	.																			.	.																															.	.	.	.
Template Sequence		K	P	V	I	W	T	V	S	V	T	R	L	.	.	F	E	L	F	R	D	I	S	L	E	F	D	H	L	A	N	I	T	.	.	P	I	Q	L	G	F	E	K	A	V	T	Y	I	R	K	K	L	A	N	E	R	C	D	A	I	I	A	A	G	S	.	.	.	.	N	G	A	Y	L	K	S	R	L	S	V	P
Template Known Secondary structure										S	S	T		.	.									T	T	T	T	T	T	S				.	.																		T	T				S								.	.	.	.							T	T		S	S
Template Predicted Secondary structure														.	.																			.	.																															.	.	.	.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.			.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40			.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70					.	.	.	.	.	.	.	.	.	80	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	G	V	P	V	Q	S	A	A	L	S	G	V	D	S	L	Y	S	I	V	Q	M	P	R	G	I	P	V	G	T	L	A	I	G	K	A	G	A	A	N	A	A	L	L	A	A	Q	I	L	A	T
Query Conservation
Alig confidence									.	.																					.	.	.	.
Template Conservation									.	.																					.	.	.	.
Template Sequence		V	I	L	I	K	P	S	.	.	G	Y	D	V	L	Q	F	L	A	K	A	G	K	L	T	S	S	I	G	V	.	.	.	.	V	T	Y	Q	E	T	I	P	A	L	V	A	F	Q	K	T	F	N	L
Template Known Secondary structure									.	.											T	T		T	T	S					.	.	.	.				S	S													T
Template Predicted Secondary structure									.	.																					.	.	.	.
Template SS confidence
		83	.	.	.	.	.	.			90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.					110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions