Return to main results Retrieve Phyre Job Id

Job DescriptionP0AG18
Confidence27.81%DateThu Jan 5 11:27:51 GMT 2012
Rank305Aligned Residues71
% Identity10%Templatec2iksA_
PDB info PDB header:transcriptionChain: A: PDB Molecule:dna-binding transcriptional dual regulator; PDBTitle: crystal structure of n-terminal truncated dna-binding transcriptional2 dual regulator from escherichia coli k12
Resolution1.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10......... 20.........30.........40.........50.........60.........70.......
Predicted Secondary structure 








...















Query SS confidence 














. . .

























































Query Sequence  NNPARVAIVMGSKSD. . . WATMQFAAEIFEILNVPHHVEVVSAHRTPDKLFSFAESAEENGYQVIIAGAGGAAHLP
Query Conservation       
 

 

 

...
     
   

  

  

 
 



 
  
             



 

  



Alig confidence 














...














..








































Template Conservation 


  



 
     
       
   
   
..                  
          


         
Template Sequence  GRTRSIGLVIPDLENTSYTRIANYLERQARQRG. . YQLLIACSEDQPDNEXRCIEHLLQRQVDAIIVSTSLPPEHP
Template Known Secondary structure 



S
S
STT..

TT
TT
S

SS
TT
Template Predicted Secondary structure 










..

















Template SS confidence 











































































   5960.........70.........80.........90. ........100.........110.........120.........130..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions