Return to main results Retrieve Phyre Job Id

Job DescriptionP0AG18
Confidence31.30%DateThu Jan 5 11:27:51 GMT 2012
Rank276Aligned Residues38
% Identity24%Templatec2i80B_
PDB info PDB header:ligaseChain: B: PDB Molecule:d-alanine-d-alanine ligase; PDBTitle: allosteric inhibition of staphylococcus aureus d-alanine:d-alanine2 ligase revealed by crystallographic studies
Resolution2.19 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10......... 20.........30.........40......
Predicted Secondary structure 






.....






Query SS confidence 












. . . . .


























Query Sequence  PARVAIVMGSKSD. . . . . WATMQFAAEIFEILNVPHHVEVVSAHR
Query Conservation     
 

 

 

.....
     
   

  

  

 
 



Alig confidence 












.....














..









Template Conservation 
  
 

 

 
 
  


 

  
  

   
..  
  
    
Template Sequence  KENICIVFGGKSAEHEVSILTAQNVLNAIDKDK. . YHVDIIYITN
Template Known Secondary structure 

SSTTS
TTT..
T
Template Predicted Secondary structure 







..



Template SS confidence 












































   3......10.........20.........30..... ....40.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions