 |
Job Description | P0AG18 | Confidence | 31.30% | Date | Thu Jan 5 11:27:51 GMT 2012 |
Rank | 276 | Aligned Residues | 38 |
% Identity | 24% | Template | c2i80B_ |
PDB info |
PDB header:ligase | Chain: B: PDB Molecule:d-alanine-d-alanine ligase; |
PDBTitle: allosteric inhibition of staphylococcus aureus d-alanine:d-alanine2 ligase revealed by crystallographic studies
|
Resolution | 2.19 Å |
|
  |   |
7 | . | . | 10 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
|
|
|
|
| . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | A | R | V | A | I | V | M | G | S | K | S | D | . |
. |
. |
. |
. |
W | A | T | M | Q | F | A | A | E | I | F | E | I | L | N | V | P | H | H | V | E | V | V | S | A | H | R |
Query Conservation |   |
  |   |   |
|   |
|
|   |
|
|   |
|
| . | . | . | . | . |
|   |   |   |   |   |
|   |   |   |
|
|   |   |
|
|   |   |
|
|   |
|   |
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |
|
|   |
|
|   |
|   |
|   |   |
|
|
|   |
|
|   |   |
|   |   |
|
|   |   |   |
| . | . |   |   |
|   |   |
|   |   |   |   |
Template Sequence |   |
K | E | N | I | C | I | V | F | G | G | K | S | A | E | H | E | V | S | I | L | T | A | Q | N | V | L | N | A | I | D | K | D | K | . |
. |
Y | H | V | D | I | I | Y | I | T | N |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |
| S | S | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S |
| T | T | T | . | . |  |  |  |  |  |  |  |  |
| T |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . |
|  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | |
|
. | . | . | . | 40 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|