Phyre 2 alignment of P0A8T7 with c3npeA

Job Description P0A8T7
Confidence 16.12% Date Wed Jan 25 15:20:19 GMT 2012

Rank 81 Aligned Residues 49

% Identity 10% Template c3npeA_

PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:9-cis-epoxycarotenoid dioxygenase 1, chloroplastic; PDBTitle: structure of vp14 in complex with oxygen

Resolution 3.20 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	393	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.			.	.	.	450	.	.	.	.	.	.	.	.	.	460
Predicted Secondary structure																																																							.	.
Query SS confidence																																																							.	.
Query Sequence	T	I	K	A	A	K	K	M	V	E	R	E	E	A	V	V	W	D	I	L	D	E	V	I	R	E	H	P	V	L	L	N	R	A	P	T	L	H	R	L	G	I	Q	A	F	E	P	V	L	I	E	G	K	A	.	.	I	Q	L	H	P	L	V	C	A	A	Y	N	A	D
Query Conservation																																																							.	.
Alig confidence																.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.		.													.	.
Template Conservation																.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.		.
Template Sequence	Y	A	R	N	G	A	N	P	C	F	D	P	V	A	G	.	.	.	.	.	H	H	L	F	D	G	D	.	.	.	.	.	.	.	.	.	.	.	.	.	G	.	M	V	H	A	L	R	I	R	N	G	A	A	E	S	Y	A	C	R	F	T	E	T	A	R	L	R	Q	E
Template Known Secondary structure						B			S	S			S	S		.	.	.	.	.			G	G	G	S		.	.	.	.	.	.	.	.	.	.	.	.	.	B	.									T	T
Template Predicted Secondary structure																.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.		.
Template SS confidence
	153	.	.	.	.	.	.	160	.	.	.	.	.	.	.						.	.	170	.	.	.	.														.		.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

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Lawrence Kelley, Benjamin Jefferys
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