Job Description P0A8T7 Confidence 24.86% Date Wed Jan 25 15:20:19 GMT 2012 Rank 54 Aligned Residues 65 % Identity 15% Template c3mv2A_ PDB info PDB header:protein transport Chain: A: PDB Molecule:coatomer subunit alpha; PDBTitle: crystal structure of a-cop in complex with e-cop Resolution 2.90 Å

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		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.					70	.		.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure																																													.	.	.	.			.
Query SS confidence																																													.	.	.	.			.
Query Sequence		P	D	M	I	R	S	W	S	F	G	E	V	K	K	P	E	T	I	N	Y	R	T	F	K	P	E	R	D	G	L	F	C	A	R	I	F	G	P	V	K	D	Y	E	.	.	.	.	C	L	.	C	G	K	Y	K	R	L	K	H	R	G	V	I	C	E	K	C	G	V	E	V	T	Q	T	K	V	R	R	E	R
Query Conservation																																													.	.	.	.			.
Alig confidence																													.	.	.														.	.	.	.			.																				.	.	.	.	.	.	.	.	.
Template Conservation																													.	.	.																																								.	.	.	.	.	.	.	.	.
Template Sequence		A	R	K	I	K	N	K	A	D	S	M	A	S	D	A	I	P	I	D	F	D	P	Y	A	K	F	D	.	.	.	I	C	A	A	T	Y	K	P	I	Y	E	D	T	P	S	V	S	D	P	L	T	G	S	K	Y	V	I	T	E	K	D	K	I	D	R	I	A	M	I	.	.	.	.	.	.	.	.	.	S	K
Template Known Secondary structure											T	S				S	S			S			T	T	S				.	.	.			T	T	T						S	S	S						T	T	T						G	G	G	T	T	S	B		S	S	S	S		.	.	.	.	.	.	.	.	.	B	B
Template Predicted Secondary structure																													.	.	.																																								.	.	.	.	.	.	.	.	.
Template SS confidence
		1122	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.				.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.										.	.
		102	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	G
Template Known Secondary structure		T	T
Template Predicted Secondary structure
Template SS confidence
		1190	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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