 |
| Job Description | P0A8T7 | | Confidence | 34.30% | Date | Wed Jan 25 15:20:19 GMT 2012 |
| Rank | 35 | Aligned Residues | 30 |
| % Identity | 17% | Template | c3bbnR_ |
| PDB info |
PDB header:ribosome | Chain: R: PDB Molecule:ribosomal protein s18; |
PDBTitle: homology model for the spinach chloroplast 30s subunit2 fitted to 9.4a cryo-em map of the 70s chlororibosome.
|
| Resolution | 9.40 Å |
|
| | |
1245 | . | . | . | . | 1250 | . | . | . | . | . | . | . | . | . | 1260 | . | . | . | . | . | . | . | . | . | 1270 | . | . | . | . |
| Predicted Secondary structure | |
|
|  |  |
|  | | | | | | | | | | |
|
| | | | | |
|
|
|
|
|
|
|
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
G | V | K | I | N | D | K | H | I | E | V | I | V | R | Q | M | L | R | K | A | T | I | V | N | A | G | S | S | D | F |
| Query Conservation | |
|
| |
|
| |
|
|
| |
|
|
|
| |
|
| | |
| |
| | | | | | | | |
| Alig confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
|
| |
|
|
|
|
|
| |
|
| | |
|
|
| | |
|
|
|
|
|
|
| |
|
|
|
| Template Sequence | |
G | D | R | I | D | Y | R | N | M | S | L | I | S | R | F | I | S | E | Q | G | K | I | L | S | R | R | V | N | R | L |
| Template Known Secondary structure | |
|
| S | S |
|
| S |
| | | | | T | T | T | S |
| S | S | S | S |
|
|
| S | S | S | T | T |
|
| Template Predicted Secondary structure | |
|
|
|
|
|
|
|
| | | | | | | |
|
|
|
|
| | |
|
|
|
|
|
|
|
|
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
25 | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
