Return to main results Retrieve Phyre Job Id

Job DescriptionP0A8T7
Confidence98.03%DateWed Jan 25 15:20:19 GMT 2012
Rank12Aligned Residues188
% Identity98%Templatec2aukA_
PDB info PDB header:transferaseChain: A: PDB Molecule:dna-directed rna polymerase beta' chain; PDBTitle: structure of e. coli rna polymerase beta' g/g' insert
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   941........950.........960.........970.........980.........990.........1000.........1010.........1020
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Query Sequence  ASRAAAESSIQVKNKGSIKLSNVKSVVNSSGKLVITSRNTELKLIDEFGRTKESYKVPYGAVLAKGDGEQVAGGETVANW
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Template Sequence  SHMAAAESSIQVKNKGSIKLSNVKSVVNSSGKLVITSRNTELKLIDEFGRTKESYKVPYGAVLAKGDGEQVAGGETVANW
Template Known Secondary structure 
SSSGGGG

SSS


TTS


SS

TTS


TT
SS
TT

TT

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   2.......10.........20.........30.........40.........50.........60.........70.........80.
 
   1021........1030.........1040.........1050.........1060.........1070.........1080.........1090.........1100
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Query Sequence  DPHTMPVITEVSGFVRFTDMIDGQTITRQTDELTGLSSLVVLDSAERTAGGKDLRPALKIVDAQGNDVLIPGTDMPAQYF
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Template Sequence  DPHTMPVITEVSGFVRFTDMIDGQTITRQTDELTGLSSLVVLDSAERTAGGKDLRPALKIVDAQGNDVLIPGTDMPAQYF
Template Known Secondary structure 
SS
SS
S

BTTT
TTT



TTTS
STTTT



TTS
B
B
TTSS
B
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   82.......90.........100.........110.........120.........130.........140.........150.........160.
 
   1101........1110.........1120........
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Query Sequence  LPGKAIVQLEDGVQISSGDTLARIPQES
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Template Conservation 

 

 
 
  
  
  





 
   
Template Sequence  LPGKAIVQLEDGVQISSGDTLARIPQES
Template Known Secondary structure 

TT
SS
TT

TT



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   162.......170.........180.........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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