Job Description P08369 Confidence 11.49% Date Wed Jan 25 15:20:13 GMT 2012 Rank 38 Aligned Residues 83 % Identity 13% Template d1iwga8 SCOP info Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain Resolution 3.50

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		354	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.								.	.	.	.	.	420	.	.	.	.	.	.
Predicted Secondary structure																																																															.	.	.	.	.	.	.
Query SS confidence																																																															.	.	.	.	.	.	.
Query Sequence		I	I	A	S	L	I	G	A	I	M	N	G	I	Y	L	Q	A	V	L	K	G	W	C	N	S	M	L	F	T	L	A	L	L	L	L	D	G	V	M	W	G	L	L	N	S	A	D	S	A	L	L	L	G	T	S	V	L	V	V	A	L	.	.	.	.	.	.	.	A	G	M	M	F	V	T	R	N	I	D	W
Query Conservation																																																															.	.	.	.	.	.	.
Alig confidence																																																															.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	S	L	Y	A	I	S	L	I	V	V	F	L	C	L	A	A	L	Y	E	S	W	S	I	P	F	S	V	M	L	V	V	P	L	G	V	I	G	A	L	L	A	A	T	F	R	G	L	T	N	D	V	Y	F	Q	V	G	L	L	T	T	I	G	L	S	A	K	N	A	I	L	I	V	E	F	A	K	D	L	M
Template Known Secondary structure																			T	T		S	S	S					G	G	G																T	T			B																														T
Template Predicted Secondary structure
Template SS confidence
		874	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.
		427	.	.	430	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	A	F	S	L	P	K	M	K	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	K	E	G	K	G	L	I	E	A
Template Known Secondary structure		T	S	S				T	T
Template Predicted Secondary structure
Template SS confidence
		954	.	.	.	.	.	960	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions