Return to main results Retrieve Phyre Job Id

Job DescriptionP08369
Confidence15.22%DateWed Jan 25 15:20:13 GMT 2012
Rank24Aligned Residues43
% Identity9%Templatec3c5oD_
PDB info PDB header:structural genomics, unknown functionChain: D: PDB Molecule:upf0311 protein rpa1785; PDBTitle: crystal structure of the conserved protein of unknown function rpa17852 from rhodopseudomonas palustris
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   195....200.........210.........220... ......230.......
Predicted Secondary structure 







.











Query SS confidence 




























.













Query Sequence  LKLNMALNLSGTGDLSVVPGGRNSEMTLT. SNWPHPSFLGDFLP
Query Conservation    
   
 
 

  
   
 

 
   
 .
 
  


 
 


Alig confidence 




























.













Template Conservation    
   
       

    
 
  


 

   

 
 
 


Template Sequence  YVFTITARIGDVTSAGEIGTGVRRIIPILGGEVKGEGISGQVLP
Template Known Secondary structure 



SS
SS


S
Template Predicted Secondary structure 















Template SS confidence 











































   910.........20.........30.........40.........50..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions