Return to main results Retrieve Phyre Job Id

Job DescriptionP08369
Confidence14.82%DateWed Jan 25 15:20:13 GMT 2012
Rank25Aligned Residues35
% Identity23%Templatec2v1lA_
PDB info PDB header:unknown functionChain: A: PDB Molecule:hypothetical protein; PDBTitle: structure of the conserved hypothetical protein vc1805 from2 pathogenicity island vpi-2 of vibrio cholerae o1 biovar3 eltor str. n16961 shares structural homology with the4 human p32 protein
Resolution2.13 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   222.......230. ........240.........250.......
Predicted Secondary structure 





...

















Query SS confidence 









. . .

























Query Sequence  LTSNWPHPSF. . . LGDFLPAKREVSESGFQAHWQSSWFA
Query Conservation 
 
 
  


... 
 


  
 
   

 
 
 

 
 
Alig confidence 









...














.









Template Conservation 






 




 

 






 
  .
  
 
 


Template Sequence  VVMNFRDSSYSAEDGGFHPVEIALSQSS. DGQWCIEYIT
Template Known Secondary structure 
TT
BTTTB




S.SS
Template Predicted Secondary structure 












.



Template SS confidence 






































   41........50.........60........ .70........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions