Job Description P0AAA9 Confidence 22.44% Date Thu Jan 5 11:12:24 GMT 2012 Rank 81 Aligned Residues 56 % Identity 16% Template c3m5gD_ PDB info PDB header:viral protein Chain: D: PDB Molecule:hemagglutinin; PDBTitle: crystal structure of a h7 influenza virus hemagglutinin Resolution 2.60 Å

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		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	S	S	A	L	Q	Q	Q	L	V	T	K	R	Y	E	Y	N	A	L	L	A	A	N	P	P	D	S	S	K	I	N	A	V	A	K	E	M	E	N	L	R	Q	S	L	D	E	L	R	V	K	R	D	I	A	M	A	E	A	G	I	P	R	G	A	G	M
Query Conservation
Alig confidence																									.	.	.	.																						.	.	.	.	.	.	.
Template Conservation																									.	.	.	.																						.	.	.	.	.	.	.
Template Sequence		N	W	T	R	D	A	M	T	E	I	W	S	Y	N	A	E	L	L	V	A	M	E	N	.	.	.	.	Q	H	T	I	D	L	A	D	S	E	M	S	K	L	Y	E	R	V	K	K	Q	.	.	.	.	.	.	.	L	R	E	N	A	E	E	D	G	T	G	C
Template Known Secondary structure																									.	.	.	.																						.	.	.	.	.	.	.		T	T	S					S	S	S
Template Predicted Secondary structure																									.	.	.	.																						.	.	.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.					.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.								.	.	.	.	130	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions