Job Description P0AAA9 Confidence 68.01% Date Thu Jan 5 11:12:24 GMT 2012 Rank 15 Aligned Residues 103 % Identity 21% Template c3bt6B_ PDB info PDB header:viral protein Chain: B: PDB Molecule:influenza b hemagglutinin (ha); PDBTitle: crystal structure of influenza b virus hemagglutinin Resolution 2.80 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.							.	.	.	.	.	.	.	40	.	.	.	.	.	.																												.	.	.	50	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	M	M	A	L	S	A	M	A	M	G	S	T	S	A	F	A	H	G	G	H	G	M	.	.	.	.	.	.	W	Q	Q	N	A	A	P	L	T	S	E	Q	Q	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	W	Q	K	I	H	N	D	F	Y
Query Conservation																									.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	F	G	A	I	A	G	F	L	E	G	G	W	E	G	M	I	A	G	W	H	G	Y	T	S	H	G	A	H	G	V	A	V	A	A	D	L	K	S	T	Q	E	A	I	N	K	I	T	K	N	L	N	S	L	S	E	L	E	V	K	N	L	Q	R	L	S	G	A	M	D	E	L	H	N	E	I	L	E	L	D
Template Known Secondary structure							T	T							T	T			S		S	S							T	T								T	T																												T	T			T	T	T
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	S	S	A	L	Q	Q	Q	L	V	T	K	R	Y	E	Y	N	A	L	L	A	A	N	P	P	D	S	S	K	I	N	A	V	A	K	E	M	E	N	L	R	Q	S	L	D	E	L	R	V	K	R	D	I	A	M	A	E	A	G	I	P	R	G	A	G	M
Query Conservation
Alig confidence																									.	.	.	.																						.	.	.	.	.	.	.
Template Conservation																									.	.	.	.																						.	.	.	.	.	.	.
Template Sequence		E	K	V	D	D	L	R	A	D	T	I	S	S	Q	I	E	L	A	V	L	L	S	N	.	.	.	.	E	G	I	I	N	S	E	D	E	H	L	L	A	L	E	R	K	L	K	K	M	.	.	.	.	.	.	.	L	G	P	S	A	V	D	I	G	N	G	C
Template Known Secondary structure																									.	.	.	.																						.	.	.	.	.	.	.	T		T	T	S				S	S	S
Template Predicted Secondary structure																									.	.	.	.																						.	.	.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.					.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.								.	.	.	.	130	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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