Job Description P0AAA9 Confidence 35.83% Date Thu Jan 5 11:12:24 GMT 2012 Rank 50 Aligned Residues 68 % Identity 10% Template c2oszA_ PDB info PDB header:structural protein Chain: A: PDB Molecule:nucleoporin p58/p45; PDBTitle: structure of nup58/45 suggests flexible nuclear pore diameter by2 intermolecular sliding Resolution 2.85 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.												.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.	.	.	.
Query Sequence		W	Q	K	I	H	N	D	F	Y	A	Q	S	S	A	L	Q	Q	Q	L	V	T	K	R	Y	E	Y	N	A	L	L	A	A	N	P	P	D	S	S	K	I	N	.	.	.	.	.	.	.	.	.	.	.	A	V	A	K	E	M	E	N	L	R	Q	S	L	D	E	L	R	V	K	R	D	I	A	M	A	E	A
Query Conservation																																											.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																											.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	R	V	L	V	Q	Q	F	E	V	Q	L	Q	Q	Y	R	Q	Q	I	E	E	L	E	N	H	L	A	T	Q	A	N	N	S	H	I	T	P	Q	D	L	S	M	A	M	Q	K	I	Y	Q	T	F	V	A	L	A	A	Q	L	Q	S	I	H	E	N	V	K	V	L	K	E	Q	Y	L	S	Y	R	K	M	F
Template Known Secondary structure																																		S
Template Predicted Secondary structure
Template SS confidence
		332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions