Job Description P0AAA9 Confidence 35.74% Date Thu Jan 5 11:12:24 GMT 2012 Rank 51 Aligned Residues 64 % Identity 20% Template c2c5iT_ PDB info PDB header:protein transport Chain: T: PDB Molecule:t-snare affecting a late golgi compartment PDBTitle: n-terminal domain of tlg1 complexed with n-terminus of2 vps51 in distorted conformation Resolution 2.3 Å

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		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	S	E	Q	Q	T	A	W	Q	K	I	H	N	D	F	Y	A	Q	S	S	A	L	Q	Q	Q	L	V	T	K	R	Y	E	Y	N	A	L	L	A	A	N	P	P	D	S	S	K	I	N	A	V	A	K	E	M	E	N	L	R	Q	S	L	D	E	L	R	V	K	R	D	I	A	M	A	E
Query Conservation
Alig confidence																																			.	.	.	.	.	.	.				.	.	.
Template Conservation																																			.	.	.	.	.	.	.				.	.	.
Template Sequence		D	D	D	Q	E	E	E	I	Q	D	I	L	K	D	V	E	E	T	I	V	D	L	D	R	S	I	I	V	X	K	R	D	E	.	.	.	.	.	.	.	N	E	D	.	.	.	V	S	G	R	E	A	Q	V	K	N	I	K	Q	Q	L	D	A	L	K	L	R	F	D	R	R	I	Q	E
Template Known Secondary structure																														T	T	T		S	.	.	.	.	.	.	.	S			.	.	.																											T	S
Template Predicted Secondary structure																																			.	.	.	.	.	.	.				.	.	.
Template SS confidence
		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.								.	.	.				70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions