Job Description P0AAA9 Confidence 42.64% Date Thu Jan 5 11:12:24 GMT 2012 Rank 36 Aligned Residues 58 % Identity 17% Template c1wpaA_ PDB info PDB header:cell adhesion Chain: A: PDB Molecule:occludin; PDBTitle: 1.5 angstrom crystal structure of human occludin fragment2 413-522 Resolution 1.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.				.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.
Query SS confidence																												.	.	.
Query Sequence		T	S	E	Q	Q	T	A	W	Q	K	I	H	N	D	F	Y	A	Q	S	S	A	L	Q	Q	Q	L	.	.	.	V	T	K	R	Y	E	Y	N	A	L	L	A	A	N	P	P	D	S	S	K	I	N	A	V	A	K	E	M	E	N	L	R
Query Conservation																												.	.	.
Alig confidence																												.	.	.
Template Conservation
Template Sequence		S	D	Q	Q	R	Q	L	Y	K	R	N	F	D	T	G	L	Q	E	Y	K	S	L	Q	S	E	L	D	E	I	N	K	E	L	S	R	L	D	K	E	L	D	D	Y	R	E	E	S	E	E	Y	M	A	A	A	D	E	Y	N	R	L	K
Template Known Secondary structure		S																																										S		T	T	S
Template Predicted Secondary structure
Template SS confidence
		425	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions