Job Description P39317 Confidence 4.05% Date Thu Jan 5 11:59:19 GMT 2012 Rank 65 Aligned Residues 53 % Identity 11% Template c3gr0D_ PDB info PDB header:membrane protein Chain: D: PDB Molecule:protein prgh; PDBTitle: periplasmic domain of the t3ss inner membrane protein prgh from2 s.typhimurium (fragment 170-362) Resolution 2.30 Å

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		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	R	E	F	F	R	C	A	T	Q	I	D	K	S	G	Y	Q	V	L	S	S	K	N	E	T	V	H	A	M	D	K	F	L	I	S	F	S	L	K	D	N	G	A	E	Y	T	M	T	L	R	G	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	L	R	A	L	M	P	Y	A	D	S	V	N	I	T	L	M	D	D	V	T	A	A	G	Q	A	E	A	G	L	K	Q	Q	A	L	P	Y	S	R	R	N	H	K	G	G	V	T	F	V	I	Q	G	A
Template Known Secondary structure								T	T		S																							T	T									T	T								S
Template Predicted Secondary structure
Template SS confidence
		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions