Job Description P0ACC3 Confidence 6.47% Date Thu Jan 5 11:17:53 GMT 2012 Rank 52 Aligned Residues 40 % Identity 28% Template c2yujA_ PDB info PDB header:protein binding Chain: A: PDB Molecule:ubiquitin fusion degradation 1-like; PDBTitle: solution structure of human ubiquitin fusion degradation2 protein 1 homolog ufd1 Resolution UNK

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		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	G	V	G	L	V	V	D	P	M	S	L	Q	Y	L	V	G	G	S	V	D	Y	T	E	G	L	E	G	S	R	F	I	V	T	N	P	N	A	K	S	T	C	G	C	G
Query Conservation
Alig confidence																								.	.	.	.	.
Template Conservation																								.	.	.	.	.
Template Sequence		K	G	G	K	I	I	M	P	P	S	A	L	D	Q	L	S	R	L	N	I	T	Y	.	.	.	.	.	P	M	L	F	K	L	T	N	K	N	S	D	R	M	T	H	C	G
Template Known Secondary structure		T	T	T															T	T			S	.	.	.	.	.	S								T	T	T	T
Template Predicted Secondary structure																								.	.	.	.	.
Template SS confidence
		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60						.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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