Job Description P0ACC3 Confidence 7.37% Date Thu Jan 5 11:17:53 GMT 2012 Rank 43 Aligned Residues 39 % Identity 21% Template c1zc1A_ PDB info PDB header:protein turnover Chain: A: PDB Molecule:ubiquitin fusion degradation protein 1; PDBTitle: ufd1 exhibits the aaa-atpase fold with two distinct2 ubiquitin interaction sites Resolution UNK

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		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	G	L	V	V	D	P	M	S	L	Q	Y	L	V	G	G	S	V	D	Y	T	E	G	L	E	G	S	R	F	I	V	T	N	P	N	A	K	S	T	C	G	C	G
Query Conservation
Alig confidence																							.	.	.	.	.
Template Conservation																							.	.	.	.	.
Template Sequence		G	G	K	I	F	L	P	P	S	A	L	S	K	L	S	M	L	N	I	R	Y	.	.	.	.	.	P	M	L	F	K	L	T	A	N	E	T	G	R	V	T	H	G	G
Template Known Secondary structure		S	S															T	T			S	.	.	.	.	.	S								T	T	T
Template Predicted Secondary structure																							.	.	.	.	.
Template SS confidence
		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.						.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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