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Job DescriptionP69826
Confidence24.86%DateThu Jan 5 12:12:09 GMT 2012
Rank103Aligned Residues111
% Identity14%Templatec3lvuB_
PDB info PDB header:transport proteinChain: B: PDB Molecule:abc transporter, periplasmic substrate-binding protein; PDBTitle: crystal structure of abc transporter, periplasmic substrate-binding2 protein spo2066 from silicibacter pomeroyi
Resolution1.79 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   344.....350.........360.........370.........380.........390.........400.........410.. ......
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Query Sequence  ESEDEFAQSANAVKAMKQEGAFSLSRVKRIAFVCDAGMGSSAMGATTFRKRLEKAGLAIEVKHYAIENV. . . . . PADADI
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Template Sequence  RRAAQFLEQAGFRIEQGQLLGPDGAPLALRFLLRQGDSDXQTV. LEIYTRALERLGIAAQIEKVDNAQYTARVAELDFDL
Template Known Secondary structure  TT
TT
TTSSB


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TT

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   412.......420.........430.........440.........450.... .....460.........470.........480.........490
 
   419420. ........430.........440..... ....450.........
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Query Sequence  VVT. . . . . . . . . . . HASLEGRVKRVTDKPLILINNYIG. . DPKLDTLFNQLTAE
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Template Sequence  TPFRRDLSLSPGNEQRLYWGSHSAGQPGT. . . . RNLXGAASPAIDAXIDRXLAA
Template Known Secondary structure 
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T
GGGTT
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   491........500.........510......... 520.........530.........540
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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