Job Description P69826 Confidence 89.27% Date Thu Jan 5 12:12:09 GMT 2012 Rank 25 Aligned Residues 156 % Identity 15% Template c3b9yA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:ammonium transporter family rh-like protein; PDBTitle: crystal structure of the nitrosomonas europaea rh protein Resolution 1.85 Å

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		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure																																																																														.	.	.	.
Query SS confidence																																																																														.	.	.	.
Query Sequence		S	V	N	G	K	S	I	F	F	M	V	A	S	N	P	G	P	G	L	G	L	L	L	A	F	T	L	F	G	K	G	M	S	K	R	S	A	P	G	A	M	I	I	H	F	L	G	G	I	H	E	L	Y	F	P	Y	V	L	M	K	P	L	T	I	I	A	M	I	A	G	G	M	S	G	T	W	.	.	.	.
Query Conservation																																																																														.	.	.	.
Alig confidence																																																								.																						.	.	.	.
Template Conservation																																																								.
Template Sequence		E	Q	M	P	Q	T	I	V	N	T	L	L	A	L	C	G	A	T	L	A	T	Y	F	L	S	A	L	F	H	K	G	K	A	S	I	V	D	M	A	N	A	A	L	A	G	G	V	A	I	G	S	V	C	N	.	I	V	G	P	V	G	A	F	V	I	G	L	L	G	G	A	I	S	V	V	G	F	V	F	I
Template Known Secondary structure		G	G																											T	T	T											T	T							T	T	T	T	T	.	T	S																						T
Template Predicted Secondary structure																																																								.
Template SS confidence
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
					284	.	.	.	.	.	290					.	.	.	.	.	.	.	.	.	300	.	.	.	.	.			.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.				330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
Predicted Secondary structure		.	.	.								.	.	.	.																.	.																									.	.	.
Query SS confidence		.	.	.								.	.	.	.																.	.																									.	.	.
Query Sequence		.	.	.	M	F	N	L	L	D	G	.	.	.	.	G	L	V	A	G	P	S	P	G	S	I	F	A	Y	L	.	.	A	L	T	P	K	G	S	F	L	A	T	I	A	G	V	T	V	G	T	L	V	S	F	A	.	.	.	I	T	S	L	I	L	K	M	E	K	T	V	E	T	E	S	E	D	E	F	A	Q
Query Conservation		.	.	.								.	.	.	.																.	.																									.	.	.
Alig confidence		.	.	.								.	.	.	.																.	.																									.	.	.																				.	.
Template Conservation																																																																															.	.
Template Sequence		Q	P	M	L	E	S	K	A	K	T	I	D	T	C	G	V	H	N	L	H	G	L	P	G	L	L	G	G	F	S	A	I	L	I	V	P	G	I	A	V	A	Q	L	T	G	I	G	I	T	L	A	L	A	L	I	G	G	V	I	A	G	A	L	I	K	L	T	G	T	T	K	Q	A	Y	E	D	S	.	.	H
Template Known Secondary structure									S					T	T						T	T														S	T	T																													T	T				S	S	T	T		G	G	.	.	G
Template Predicted Secondary structure																																																																															.	.
Template SS confidence
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.			.
		352	.	.	.	.	.	.	.	360	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	N	A	V	K	A	M	K	Q	E	G	A	F	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	F	I	H	L	A	G	P	E	D	E	H	K	A	E
Template Known Secondary structure		T	S	S	S				G	G	G	T	T
Template Predicted Secondary structure
Template SS confidence
		383	.	.	.	.	.	.	390	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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