Return to main results Retrieve Phyre Job Id

Job DescriptionQ46833
Confidence3.34%DateThu Jan 5 12:34:58 GMT 2012
Rank63Aligned Residues30
% Identity10%Templatec3pruD_
PDB info PDB header:photosynthesisChain: D: PDB Molecule:phycobilisome 32.1 kda linker polypeptide, phycocyanin- PDBTitle: crystal structure of phycobilisome 32.1 kda linker polypeptide,2 phycocyanin-associated, rod 1 (fragment 14-158) from synechocystis3 sp. pcc 6803, northeast structural genomics consortium target sgr182a
Resolution2.68 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   164.....170.........180.. .......190...
Predicted Secondary structure 




.....



Query SS confidence 


















. . . . .










Query Sequence  AQSRTQAEEQFLTLFPEQK. . . . . RIVNLRSQVTM
Query Conservation    
       
   

   ..... 
 
   

  
Alig confidence 


















.....










Template Conservation       

 






         
   


 


Template Sequence  DDAKXVIRAVYRQVLGNDYIXDSERLKGAESLLTN
Template Known Secondary structure 

S


GGGS
Template Predicted Secondary structure 







Template SS confidence 


































   30.........40.........50.........60....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions