Return to main results Retrieve Phyre Job Id

Job DescriptionQ46833
Confidence11.13%DateThu Jan 5 12:34:58 GMT 2012
Rank24Aligned Residues33
% Identity12%Templatec3hd7A_
PDB info PDB header:exocytosisChain: A: PDB Molecule:vesicle-associated membrane protein 2; PDBTitle: helical extension of the neuronal snare complex into the membrane,2 spacegroup c 1 2 1
Resolution3.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   122.......130.........140.........150....
Predicted Secondary structure 



Query SS confidence 
































Query Sequence  QPRVSYRKQWARWRVMILPILLILVALAVERGV
Query Conservation 
           

  
  
   
         
Alig confidence 
































Template Conservation 
  


  
    
  


   
   
  

  
Template Sequence  AAKLKRKYWWKNLKMMIILGVICAIILIIIIVY
Template Known Secondary structure  T
Template Predicted Secondary structure 
Template SS confidence 
































   81........90.........100.........110...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions