Job Description Q46833 Confidence 99.94% Date Thu Jan 5 12:34:58 GMT 2012 Rank 1 Aligned Residues 122 % Identity 16% Template c1yf5L_ PDB info PDB header:transport protein Chain: L: PDB Molecule:general secretion pathway protein l; PDBTitle: cyto-epsl: the cytoplasmic domain of epsl, an inner membrane component2 of the type ii secretion system of vibrio cholerae Resolution 2.75 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.					40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.		.	.	.	.
Predicted Secondary structure																																									.	.	.	.																																	.
Query SS confidence																																									.	.	.	.																																	.
Query Sequence		M	I	H	Q	Q	H	M	R	N	I	A	Q	W	L	Q	E	N	G	I	T	R	A	T	V	A	P	D	W	M	S	I	P	C	G	F	M	A	C	D	.	.	.	.	A	Q	R	V	I	C	R	I	D	E	C	R	G	W	S	A	G	L	A	L	A	P	V	M	F	R	A	Q	L	N	E	Q	.	D	L	P	L
Query Conservation																																									.	.	.	.																																	.
Alig confidence																																									.	.	.	.																																	.
Template Conservation
Template Sequence		G	V	D	R	L	W	L	R	A	C	L	D	H	L	K	A	C	G	F	D	V	K	R	V	L	P	D	V	L	A	I	P	R	P	E	H	G	L	A	A	L	Q	L	G	D	E	W	L	V	R	K	S	T	T	Q	G	X	A	V	D	A	Q	W	L	S	L	L	A	A	S	D	W	V	Q	N	E	G	E	Y	L
Template Known Secondary structure																		T	T									G	G	G	G	S				S	S	S							T	T							S	S	S							G	G	G							S	G	G	G			T	T
Template Predicted Secondary structure
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
		76	.	.	.	80	.	.	.	.	.	.	.	.		.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure															.
Query SS confidence															.
Query Sequence		S	L	T	V	V	G	I	A	P	E	K	L	S	.	A	W	A	G	A	D	A	E	R	L	T	V	T	A	L	P	A	I	T	T	Y	G	E	P	E	G	N	L	L	T	G	P	W	Q
Query Conservation															.
Alig confidence															.
Template Conservation
Template Sequence		P	L	Q	A	L	T	P	L	P	E	L	S	L	A	E	T	Q	E	W	R	Y	E	P	S	G	L	V	X	Q	L	L	T	Q	E	A	L	T	S	K	F	N	L	L	T	G	S	F	K
Template Known Secondary structure						S	S									T	T					B				S																	S			G	G	G
Template Predicted Secondary structure
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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