Job Description P32167 Confidence 4.20% Date Thu Jan 5 11:49:44 GMT 2012 Rank 96 Aligned Residues 61 % Identity 13% Template c1u5tB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:defective in vacuolar protein sorting; vps36p; PDBTitle: structure of the escrt-ii endosomal trafficking complex Resolution 3.60 Å

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		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	D	R	Q	Y	C	S	E	V	V	W	K	V	Y	Q	N	A	L	G	M	R	V	G	E	Q	Q	K	L	K	E	F	D	L	S	S	P	Q	V	Q	A	K	L	K	E	R	Y	G	K	N	I	P	L	E	E	T	V	V	S	P	Q	A	V	F	D	A
Query Conservation
Alig confidence																																																		.	.	.	.
Template Conservation																																																		.	.	.	.
Template Sequence		N	K	E	L	F	L	D	E	I	A	R	E	I	Y	E	F	T	L	S	E	F	K	D	L	N	S	D	T	N	Y	M	I	I	T	L	V	D	L	Y	A	M	Y	N	K	S	M	R	I	.	.	.	.	G	T	G	L	I	S	P	M	E	M	R	E	A
Template Known Secondary structure		S	S	T	T															T	T	T	T	T	S	S	S									T	T									T	T	T	S	.	.	.	.	S	S
Template Predicted Secondary structure																																																		.	.	.	.
Template SS confidence
		403	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450					.	.	.	.	.	.	.	.	.	460	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions