Job Description P76463 Confidence 91.86% Date Thu Jan 5 12:23:09 GMT 2012 Rank 15 Aligned Residues 187 % Identity 16% Template d1vqqa3 SCOP info beta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like beta-Lactamase/D-ala carboxypeptidase Resolution 1.80

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		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.			.	.	.	.	80	.	.	.	.	.										.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure																						.	.											.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.											.	.	.	.	.	.	.	.	.
Query Sequence		T	P	L	G	S	L	W	K	L	Y	V	Y	A	W	L	E	D	T	H	Q	.	.	P	E	Q	P	Y	Q	C	R	G	N	.	.	.	.	.	.	.	.	.	S	P	E	E	V	Y	C	C	Q	A	G	E	S	I	T	R	D	T	A	L	V	R	S	C	G	L	Y	F	A	P	Q	R	L	H	I	G	A	D	V
Query Conservation																						.	.											.	.	.	.	.	.	.	.	.
Alig confidence																						.	.											.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	S	P	G	S	T	Q	K	I	L	T	A	M	I	G	L	N	N	K	T	L	D	D	K	T	S	Y	K	I	D	G	K	G	W	Q	K	D	K	S	W	G	G	Y	N	V	T	R	Y	E	V	V	N	G	N	I	D	L	K	Q	A	I	E	S	S	D	N	I	F	F	A	R	V	A	L	E	L	G	S	K	K
Template Known Secondary structure		B			G	G	G												T	T	S	S		T	T							S	S				S	S	G	G	G	T	T						S	S														T	T
Template Predicted Secondary structure
Template SS confidence
		399	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.
		125	.	.	.	.	130	.	.	.																							.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		W	G	Q	Y	W	Q	Q	R	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	P	A	W	L	A	S	L	T	T	L	K	P	E	T	S	V	T	V	K	S	L	L	D	S	L	A	T	L	P	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	E	K	G	M	K	K	L	G	V	G	E	D	I	P	S	D	Y	P	F	Y	N	A	Q	I	S	N	K	N	L	D	N	E	I	L	L	A	D	S	G	Y	G	Q	G	E	I	L	I	N	P	V	Q	I	L	S	I	Y	S	A	L	E	N	N	G	N	I	N	A	P	H	L	L	K	D	T	K	N	K	V	W
Template Known Secondary structure									T	T	T	T	S					S	S						B	S		S	S				S									T	T		S	S		B	B											G	G	G	T	T	T						B			T	T	S
Template Predicted Secondary structure
Template SS confidence
		479	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.
							165	.	.	.	.	170	.	.	.	.	.	.				.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.					220	.	.	.	.	.				.	.	.	.
Predicted Secondary structure		.	.	.	.	.													.	.	.																																												.	.	.	.							.	.	.
Query SS confidence		.	.	.	.	.													.	.	.																																												.	.	.	.							.	.	.
Query Sequence		.	.	.	.	.	Q	N	K	A	Q	E	V	L	L	D	V	V	.	.	.	L	D	E	A	K	I	G	V	A	S	M	L	G	S	R	V	R	V	K	T	W	S	W	F	A	D	D	K	Q	E	I	R	Q	G	G	F	A	G	W	L	T	D	G	.	.	.	.	T	P	L	W	V	T	.	.	.	G	S	G	T
Query Conservation		.	.	.	.	.													.	.	.																																												.	.	.	.							.	.	.
Alig confidence		.	.	.	.	.													.	.	.																									.	.	.																	.	.	.	.							.	.	.
Template Conservation																																														.	.	.
Template Sequence		K	K	N	I	I	S	K	E	N	I	N	L	L	T	D	G	M	Q	Q	V	V	N	K	T	H	K	E	D	I	Y	R	S	Y	A	N	L	I	G	K	S	G	T	A	E	.	.	.	L	K	G	R	Q	I	G	W	F	I	S	Y	D	K	D	N	P	N	M	M	M	A	I	N	V	K	D	V	Q	D	K	G	M
Template Known Secondary structure						S																		T	T	T	T	T	T	T			T	T	S											.	.	.														T	T	S		S											T	T	T	T	T
Template Predicted Secondary structure																																														.	.	.
Template SS confidence
		559	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.				.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	K	T	V	L	T	R	Y	A	T	V	L	N	R	V	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	S	Y	N	A	K	I	S	G	K	V	Y	D	E	L	Y
Template Known Secondary structure																	T
Template Predicted Secondary structure
Template SS confidence
		642	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions