Job Description P76463 Confidence 96.32% Date Thu Jan 5 12:23:09 GMT 2012 Rank 2 Aligned Residues 188 % Identity 17% Template c3oc2A_ PDB info PDB header:penicillin-binding protein Chain: A: PDB Molecule:penicillin-binding protein 3; PDBTitle: crystal structure of penicillin-binding protein 3 from pseudomonas2 aeruginosa Resolution 1.97 Å

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		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.			80	.	.	.	.	.				.	.	.	.	90	.	.	.	.	.	.	.			.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.							.	.	.													.	.
Query SS confidence																									.	.							.	.	.													.	.
Query Sequence		P	L	G	S	L	W	K	L	Y	V	Y	A	W	L	E	D	T	H	Q	P	E	Q	P	.	.	Y	Q	C	R	G	N	.	.	.	S	P	E	E	V	Y	C	C	Q	A	G	E	.	.	S	I	T	R	D	T	A	L	V	R	S	C	G	L	Y	F	A	P	Q	R	L	H	I	G	A	D	V	W	G	Q	Y	W
Query Conservation																									.	.							.	.	.													.	.
Alig confidence																									.	.							.	.	.													.	.
Template Conservation
Template Sequence		E	P	G	S	T	V	K	P	F	S	M	S	A	A	L	A	S	G	R	W	K	P	S	D	I	V	D	V	Y	P	G	T	L	Q	I	G	R	Y	T	I	R	D	V	S	R	N	S	R	Q	L	D	L	T	G	I	L	I	K	S	S	N	V	G	I	S	K	I	A	F	D	I	G	A	E	S	I	Y	S	V	M
Template Known Secondary structure		B		G	G	G	G											T	T	S			T	T						T	T	S					T	T						S					S										T	T
Template Predicted Secondary structure
Template SS confidence
		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370
		130	.	.	.																								.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	Q	R	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	P	A	W	L	A	S	L	T	T	L	K	P	E	T	S	V	T	V	K	S	L	L	D	S	L	A	T	L	P	A	Q	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																									.
Template Sequence		Q	Q	V	G	L	G	Q	D	T	G	L	G	F	P	G	E	R	V	G	N	L	P	N	H	R	K	W	P	K	A	E	T	A	T	L	A	Y	G	Y	.	G	L	S	V	T	A	I	Q	L	A	H	A	Y	A	A	L	A	N	D	G	K	S	V	P	L	S	M	T	R	V	D	R	V	P	D	G	V	Q	V	I
Template Known Secondary structure				T	T	T	T	S					S		T	T					B					S	S											T	T		.	S		B	B														T	T	T						B	S	B			S	S								S
Template Predicted Secondary structure																																									.
Template SS confidence
		371	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.		410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.
								167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.										.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure		.	.	.	.	.	.																																																								.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.																																																								.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	K	A	Q	E	V	L	L	D	V	V	L	D	E	A	K	I	G	V	A	S	M	L	G	S	R	V	R	V	K	T	W	S	W	F	A	D	D	K	Q	E	I	R	Q	G	G	F	A	G	W	L	T	D	G	T	P	.	.	.	.	.	.	.	.	.	L	W	V	T	G	S	G	T	S	K
Query Conservation		.	.	.	.	.	.																																																								.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.	.	.	.
Template Sequence		S	P	E	V	A	S	T	V	Q	G	M	L	Q	Q	V	V	E	A	Q	G	G	V	F	R	A	Q	V	P	G	Y	H	A	A	G	K	S	.	.	.	.	.	.	.	.	.	G	T	A	R	K	A	Y	R	S	L	F	A	G	F	A	P	A	T	D	P	R	I	A	M	V	V	V	I	D	E	P	F	G	G	L
Template Known Secondary structure																			S	T	T	S		G	G	G			T	T	S							.	.	.	.	.	.	.	.	.																	T	T	S
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.
Template SS confidence
		450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.										.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	V	L	T	R	Y	A	T	V	L	N	R	V	L	P	V	P	T	Q	V	A	S	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	S	A	P	V	F	S	K	V	M	A	G	A	L	R	L	M	N	V	P	P	D	N
Template Known Secondary structure			T															T	T
Template Predicted Secondary structure
Template SS confidence
		535	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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