 |
Job Description | P76463 | Confidence | 18.33% | Date | Thu Jan 5 12:23:09 GMT 2012 |
Rank | 50 | Aligned Residues | 44 |
% Identity | 18% | Template | c3g5jA_ |
PDB info |
PDB header:nucleotide binding protein | Chain: A: PDB Molecule:putative atp/gtp binding protein; |
PDBTitle: crystal structure of n-terminal domain of putative atp/gtp binding2 protein from clostridium difficile 630
|
Resolution | 1.76 Å |
|
  |   |
83 | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |
|
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | G | N | S | P | E | E | V | Y | C | C | Q | A | G | E | S | I | T | R | D | T | A | L | V | R | S | C | G | L | Y | F | A | P | Q | R | L | H | I | G | A | D | V | W | G | Q | Y |
Query Conservation |   |
  |
|   |   |   |
|
|
|
|
|
|   |   |
|   |
|
|   |
|   |   |
|
|
|   |
|
|
|
|
|
|   |
|   |
|
|   |
|   |   |   |   |
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |
|
|   |   |   |   |   |
|   |
|
|   |   |
|   |   |   |
|   |   |   |
|   | . | . |   |
|   |   |
|   |
|
|   |   |
|
|
|   |   |
Template Sequence |   |
L | N | Y | D | N | I | V | I | Y | C | A | R | G | G | X | R | S | G | S | I | V | N | L | L | S | S | L | G | V | . |
. |
N | V | Y | Q | L | E | G | G | Y | K | A | Y | R | N | F |
Template Known Secondary structure |   |
T | T |
| S |  |  |  |  |  |
| S | S | S | S |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| . | . |
|
|  |  |  | T | T |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
84 | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | |
|
. | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|