 |
Job Description | P76463 | Confidence | 81.11% | Date | Thu Jan 5 12:23:09 GMT 2012 |
Rank | 25 | Aligned Residues | 57 |
% Identity | 19% | Template | c3dwkC_ |
PDB info |
PDB header:transferase | Chain: C: PDB Molecule:penicillin-binding protein 2; |
PDBTitle: identification of dynamic structural motifs involved in2 peptidoglycan glycosyltransfer
|
Resolution | 3.10 Å |
|
 |
  |   |
57 | . | . | 60 | . | . | . | . | . | . | |
. | . | . | 70 | . | . | . | . | |
|
|
|
|
|
|
. | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | L | G | S | L | W | K | L | Y | V | . |
Y | A | W | L | E | D | T | H | . |
. |
. |
. |
. |
. |
. |
Q | P | E | Q | P | Y | Q | C | R | G | N | S | P | E | E | V | Y | C | C | Q | A | G | E | S | I | T | R | D | T | A | L | V | R | S | C | G | L | Y | F |
Query Conservation |   |
|
|
|
|   |
|
|
|
|
| . |
|   |   |
|   |   |   |   | . | . | . | . | . | . | . |   |   |   |   |   |
|   |
|   |
|   |   |   |
|
|
|
|
|
|   |   |
|   |
|
|   |
|   |   |
|
|
|   |
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|
|   |
|
|   |   |   |
|
|
|
|
|
|   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |
|   |
|
|
|   |   |
|
|   |   |
|   |
|   |   |   |
Template Sequence |   |
P | T | G | S | S | L | K | P | F | L | A | Y | G | P | A | I | E | N | M | K | W | A | T | N | H | A | I | Q | D | E | S | S | Y | Q | V | D | G | S | T | F | R | N | Y | D | T | K | S | H | G | T | V | S | I | Y | D | A | L | R | Q | S | F | N | I | P | A |
Template Known Secondary structure |   |
 |
| G | G | G | G |  |  |  |  | T |  |  |  |  |  |  |  | S |
|
|
| T | T | B |  |  |  |
|
| S |
|
| B | S | S | S |
| B |
|
|
| T | T |
|
|
|
|
|  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|  |  |  |
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
395 | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|