Return to main results Retrieve Phyre Job Id

Job DescriptionP76463
Confidence87.68%DateThu Jan 5 12:23:09 GMT 2012
Rank19Aligned Residues77
% Identity16%Templatec1qmfA_
PDB info PDB header:peptidoglycan synthesisChain: A: PDB Molecule:penicillin-binding protein 2x; PDBTitle: penicillin-binding protein 2x (pbp-2x) acyl-enzyme complex
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   57..60.........70.... .....80..... ....90.........100.........110.........120......
Predicted Secondary structure 



.










.........


















Query SS confidence 

















.










. . . . . . . . .








































Query Sequence  PLGSLWKLYVYAWLEDTH. QPEQPYQCRGN. . . . . . . . . SPEEVYCCQAGESITRDTALVRSCGLYFAPQRLHIGADVWG
Query Conservation 



 





  
    .     
 
 
 .........  





  
 

 
  


 





 
 

 
    

Alig confidence 

















.










.........








































Template Conservation   





  
 




 
                                
 
 
  

  
 
     
   

     
Template Sequence  EPGSTMKVMMLAAAIDNNTFPGGEVFNSSELKIADATIRDWDVNEGLTGGRMMTFSQGFAHSSNVGMTLLEQKMGDATWL
Template Known Secondary structure 

GGGGTT


TT

S
SSS


S
TT
S
TT

Template Predicted Secondary structure 






























Template SS confidence 















































































   334.....340.........350.........360.........370.........380.........390.........400.........410...
 
   127..130...
Predicted Secondary structure 


Query SS confidence 






Query Sequence  QYWQQRQ
Query Conservation    

   
Alig confidence 






Template Conservation        
Template Sequence  DYLNRFK
Template Known Secondary structure  TT
Template Predicted Secondary structure 

Template SS confidence 






   414.....420
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions