Phyre 2 alignment of P0AC00 with d1iata

Job Description P0AC00
Confidence 98.97% Date Thu Jan 5 11:16:48 GMT 2012

Rank 48 Aligned Residues 301

% Identity 11% Template d1iata_

SCOP info SIS domain SIS domain Phosphoglucose isomerase, PGI

Resolution 1.62

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.									.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.						.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.																																						.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.																																						.	.	.	.	.
Query Sequence	L	S	H	D	V	P	L	V	H	A	I	V	E	E	M	V	K	.	.	.	.	.	.	.	.	R	D	I	D	R	I	Y	F	V	A	C	G	S	P	L	N	A	A	Q	T	A	K	H	L	A	D	R	F	S	D	L	Q	V	Y	A	I	S	.	.	.	.	.	G	W	E	F	C	D	N	T	P	Y	R	L	D
Query Conservation																		.	.	.	.	.	.	.	.																																						.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.																																						.	.	.	.	.
Template Conservation
Template Sequence	V	N	K	V	L	D	K	M	K	S	F	C	Q	R	V	R	S	G	D	W	K	G	Y	T	G	K	T	I	T	D	V	I	N	I	G	I	G	G	S	D	L	G	P	L	M	V	T	E	A	L	K	P	Y	S	S	G	G	P	R	V	W	Y	V	S	N	I	D	G	T	H	I	A	K	T	L	A	Q	L	N	P
Template Known Secondary structure																		T		S	B		T	T	S		B										G	G	G	T										T	G	G	G		T	T										S	S									T	T			G
Template Predicted Secondary structure
Template SS confidence
	121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200

	92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.												.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.			140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.																						.	.
Query SS confidence																												.	.	.	.	.	.	.	.	.	.	.																						.	.
Query Sequence	D	R	C	A	V	I	G	V	S	D	Y	G	K	T	E	E	V	I	K	A	L	E	L	G	R	A	C	.	.	.	.	.	.	.	.	.	.	.	G	A	L	T	A	A	F	T	K	R	A	D	S	P	I	T	S	A	A	E	F	.	.	S	I	D	Y	Q	A	D	C	I	W	E	I	H	L	L	L	C	Y	S
Query Conservation																												.	.	.	.	.	.	.	.	.	.	.																						.	.
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.																						.	.
Template Conservation
Template Sequence	E	S	S	L	F	I	I	A	S	K	T	F	T	T	Q	E	T	I	T	N	A	E	T	A	K	E	W	F	L	Q	A	A	K	D	P	S	A	V	A	K	H	F	V	A	L	S	T	N	T	T	K	V	K	E	F	G	I	D	P	Q	N	M	F	E	F	W	D	W	V	G	G	R	Y	S	L	W	S	A	I	G
Template Known Secondary structure	G	G								S	S	S																							G	G	G										S									T			G	G	G						T	T	S		G	G	G		T	T	T	G	G	G
Template Predicted Secondary structure
Template SS confidence
	201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280

	159	160	.	.	.	.	.	.	.	.	.		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.		.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.		.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure												.																		.																																	.
Query SS confidence												.																		.																																	.
Query Sequence	V	V	L	E	M	I	T	R	L	A	P	.	N	A	E	I	G	K	I	K	N	D	L	K	Q	L	P	N	A	.	L	G	H	L	V	R	T	W	E	E	K	G	R	Q	L	G	E	L	A	S	Q	W	P	M	I	Y	T	V	A	A	G	P	.	L	R	P	L	G	Y	K	E	G	I	V	T	L	M	E	F	T
Query Conservation												.																		.																																	.
Alig confidence												.																		.																																	.												.
Template Conservation																																																																											.
Template Sequence	L	S	I	A	L	H	V	G	F	D	N	F	E	Q	L	L	S	G	A	H	W	M	D	Q	H	F	R	T	T	P	L	E	K	N	A	P	V	L	L	A	L	L	G	I	W	Y	I	N	C	F	G	C	E	T	H	A	M	L	P	Y	D	Q	Y	L	H	R	F	A	A	Y	F	Q	Q	G	.	D	M	E	S	N
Template Known Secondary structure																													S		G	G	G																T	S										S		G	G	G	T	T									.
Template Predicted Secondary structure																																																																											.
Template SS confidence
	281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.		.	.	.	.	.

	236	.	.																.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.				260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.														.	.	.	.	280	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence	W	T	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	C	V	I	E	S	G	E	F	R	H	G	P	L	E	I	V	E	P	G	V	.	.	.	P	F	L	F	L	L	G	N	D	E	S	R	H	T	T	E	.	.	.	.	.	.	.	.	.	.	.	.	.	R	A	I	N	F	V	K	Q	R
Query Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence	G	K	Y	I	T	K	S	G	T	R	V	D	H	Q	T	G	P	I	V	W	G	E	P	G	T	N	G	Q	H	A	F	Y	Q	L	I	H	Q	G	T	K	M	I	P	C	D	F	L	I	P	V	Q	T	Q	H	P	I	R	K	G	L	H	H	K	I	L	L	A	N	F	L	A	Q	T	E	A	L	M	R	G	K
Template Known Secondary structure				B	B	T	T	S		B		S	S											T	T	G	G	G	G	T	T							S	S														S																											B
Template Predicted Secondary structure
Template SS confidence
	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.

																															285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.		.	330	.
Predicted Secondary structure	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																													.
Query SS confidence	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																													.
Query Sequence	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	D	N	V	I	V	I	D	Y	A	E	I	S	Q	G	L	H	P	W	L	A	P	F	L	M	F	V	P	M	E	W	L	C	Y	Y	L	S	I	Y	K	D	H	N	P	.	D	E	R
Query Conservation	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																													.
Alig confidence	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.																				.
Template Conservation																																																			.	.	.	.	.
Template Sequence	S	T	E	E	A	R	K	E	L	Q	A	A	G	K	S	P	E	D	L	E	R	L	L	P	H	K	V	F	E	G	N	R	P	T	N	S	I	V	F	T	K	L	T	P	F	M	L	G	A	L	.	.	.	.	.	V	A	M	Y	E	H	K	I	F	V	Q	G	I	I	W	D	I	N	S	F	D	Q	W
Template Known Secondary structure												T	T										G	G	G	G		B																							.	.	.	.	.																T	B		T	T			G
Template Predicted Secondary structure																																																			.	.	.	.	.
Template SS confidence
	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.						490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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