Job Description P0AC00 Confidence 88.05% Date Thu Jan 5 11:16:48 GMT 2012 Rank 77 Aligned Residues 128 % Identity 9% Template c3izbA_ PDB info PDB header:ribosome Chain: A: PDB Molecule:40s ribosomal protein rps0 (s2p); PDBTitle: localization of the small subunit ribosomal proteins into a 6.1 a2 cryo-em map of saccharomyces cerevisiae translating 80s ribosome Resolution NULL Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.		.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure																			.
Query SS confidence																			.
Query Sequence		L	S	H	D	V	P	L	V	H	A	I	V	E	E	M	V	K	.	R	D	I	D	R	I	Y	F	V	A	C	G	S	P	L	N	A	A	Q	T	A	K	H	L	A	D	R	F	S	D	L	Q	V	Y	A	I	S	G	W	E	F	C	D	N	T	P	Y	R	L	D	D	R	C	A	V	I	G	V	S	D	Y	G
Query Conservation																			.
Alig confidence																			.																																								.
Template Conservation																																																											.
Template Sequence		V	G	K	T	W	E	K	L	V	L	A	A	R	I	I	A	A	I	P	N	P	E	D	V	V	A	I	S	S	R	T	F	G	Q	R	A	V	L	K	F	A	A	H	T	G	A	T	P	I	A	G	R	F	T	P	G	S	.	F	T	N	Y	I	T	R	S	F	K	E	P	R	L	V	I	V	T	D	P	R	S
Template Known Secondary structure																					S	S									S	T	T	T												T						S	S			S	S	T	.	T	T	S	T	T	S	S		S	S			S					S		T	T	T
Template Predicted Secondary structure																																																											.
Template SS confidence
		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.		.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	T	E	E	V	I	K	A	L	E	L	G	R	A	C	G	A	L	T	A	A	F	T	K	R	A	D	S	P	I	T	S	A	A	E	F	S	I	D	Y	Q	A	D	C	I	W	E	I	H	L	L	L	C	Y	S	V
Query Conservation
Alig confidence				.	.	.	.																									.	.
Template Conservation				.	.	.	.																									.	.
Template Sequence		D	A	.	.	.	.	Q	A	I	K	E	A	S	Y	V	N	I	P	V	I	A	L	T	D	L	D	S	P	S	E	.	.	F	V	D	V	A	I	P	C	N	N	R	G	K	H	S	I	G	L	I	W	Y	L	L	A
Template Known Secondary structure		T		.	.	.	.										T									T	T	S		S	T	.	.	T		S							S	S	S	T
Template Predicted Secondary structure				.	.	.	.																									.	.
Template SS confidence
		129	130					.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.			.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions