Job Description P0AC00 Confidence 91.32% Date Thu Jan 5 11:16:48 GMT 2012 Rank 69 Aligned Residues 128 % Identity 10% Template c3iz6A_ PDB info PDB header:ribosome Chain: A: PDB Molecule:40s ribosomal protein sa (s2p); PDBTitle: localization of the small subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome Resolution 5.50 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.		.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure																			.
Query SS confidence																			.
Query Sequence		L	S	H	D	V	P	L	V	H	A	I	V	E	E	M	V	K	.	R	D	I	D	R	I	Y	F	V	A	C	G	S	P	L	N	A	A	Q	T	A	K	H	L	A	D	R	F	S	D	L	Q	V	Y	A	I	S	G	W	E	F	C	D	N	T	P	Y	R	L	D	D	R	C	A	V	I	G	V	S	D	Y	G
Query Conservation																			.
Alig confidence																			.																																								.
Template Conservation																																																											.
Template Sequence		L	G	K	T	W	E	K	L	Q	L	A	A	R	V	I	V	A	I	E	N	P	Q	D	I	I	V	Q	S	A	R	P	Y	G	Q	R	A	V	L	K	F	A	Q	Y	T	G	A	H	A	I	A	G	R	H	T	P	G	T	.	F	T	N	Q	L	Q	T	S	F	S	E	P	R	L	L	I	L	T	D	P	R	T
Template Known Secondary structure																			T	T	S	S									S															T						S				T	T	T	.	T	T	T	T	T	T	S		S	S			S					S		T	T	T
Template Predicted Secondary structure																																																											.
Template SS confidence
		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.		.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	T	E	E	V	I	K	A	L	E	L	G	R	A	C	G	A	L	T	A	A	F	T	K	R	A	D	S	P	I	T	S	A	A	E	F	S	I	D	Y	Q	A	D	C	I	W	E	I	H	L	L	L	C	Y	S	V
Query Conservation
Alig confidence			.	.	.	.																									.	.
Template Conservation			.	.	.	.																									.	.
Template Sequence		D	.	.	.	.	H	Q	P	I	K	E	S	A	L	G	N	I	P	T	I	A	F	C	D	T	D	S	P	M	.	.	R	Y	V	D	I	G	I	P	A	N	N	K	G	K	Q	S	I	G	C	L	F	W	L	L	A
Template Known Secondary structure		T	.	.	.	.											T									T	T	S		G	.	.	G	G		S					S			S	S	T
Template Predicted Secondary structure			.	.	.	.																									.	.
Template SS confidence
		134					.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.			.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions