Job Description P0AC00 Confidence 99.01% Date Thu Jan 5 11:16:48 GMT 2012 Rank 47 Aligned Residues 307 % Identity 14% Template c3hjbA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:glucose-6-phosphate isomerase; PDBTitle: 1.5 angstrom crystal structure of glucose-6-phosphate isomerase from2 vibrio cholerae. Resolution 1.50 Å

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.									.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.					.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.																																				.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.																																				.	.	.	.
Query Sequence		Q	E	V	E	K	V	L	S	H	D	V	P	L	V	H	A	I	V	E	E	M	V	K	.	.	.	.	.	.	.	.	R	D	I	D	R	I	Y	F	V	A	C	G	S	P	L	N	A	A	Q	T	A	K	H	L	A	D	R	F	S	D	L	Q	V	Y	A	.	.	.	.	I	S	G	W	E	F	C	D	N	T
Query Conservation																									.	.	.	.	.	.	.	.																																				.	.	.	.
Alig confidence																									.	.	.	.	.	.	.	.																																				.	.	.	.
Template Conservation
Template Sequence		E	D	V	M	P	A	V	N	A	V	L	A	K	M	K	A	F	S	E	R	V	I	G	G	E	W	K	G	F	T	G	K	A	I	T	D	V	V	N	I	G	I	G	G	S	D	L	G	P	Y	M	V	T	E	A	L	V	P	Y	K	N	H	L	T	V	H	F	V	S	N	V	D	G	T	H	M	A	E	T	L
Template Known Secondary structure				S																					T		S	B		T	T	S		B										G	G	G	T										T	G	G	G			S									S	S
Template Predicted Secondary structure
Template SS confidence
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.												.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.					.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.
Query Sequence		P	Y	R	L	D	D	R	C	A	V	I	G	V	S	D	Y	G	K	T	E	E	V	I	K	A	L	E	L	G	R	A	.	.	.	.	.	.	.	.	.	.	.	C	G	A	L	T	A	A	F	T	K	R	A	D	S	P	I	T	S	A	A	E	.	.	.	.	F	S	I	D	Y	Q	A	D	C	I	W	E	I
Query Conservation																																	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.
Alig confidence																																	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.
Template Conservation
Template Sequence		K	N	V	D	P	E	T	T	L	F	L	V	A	S	K	T	F	T	T	Q	E	T	M	T	N	A	H	T	A	R	D	W	F	L	K	A	A	G	D	E	A	H	V	A	K	H	F	A	A	L	S	T	N	G	K	A	V	A	E	F	G	I	D	T	D	N	M	F	E	F	W	D	W	V	G	G	R	Y	S	L
Template Known Secondary structure		T	T			G	G	G								S	S	S																						S	G	G	G	G	G	G	T					S	S									T			G	G	G						T	T	S		G	G	G		T
Template Predicted Secondary structure
Template SS confidence
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.		.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure																																																																					.
Query SS confidence																																																																					.
Query Sequence		H	L	L	L	C	Y	S	V	V	L	E	M	I	T	R	L	A	P	N	A	E	I	G	K	I	K	N	D	L	K	Q	L	P	N	A	L	G	H	L	V	R	T	W	E	E	K	G	R	Q	L	G	E	L	A	S	Q	W	P	M	I	Y	T	V	A	A	G	P	.	L	R	P	L	G	Y	K	E	G	I	V	T
Query Conservation																																																																					.
Alig confidence																																																																					.												.
Template Conservation																																																																																	.
Template Sequence		W	S	A	I	G	L	S	I	I	L	S	I	G	Y	D	N	F	V	E	L	L	A	G	A	H	E	M	D	Q	H	F	V	N	T	P	F	E	S	N	I	P	V	I	L	A	L	I	G	I	W	Y	N	N	F	H	G	A	E	S	E	A	I	L	P	Y	D	Q	Y	L	H	R	F	A	A	Y	F	Q	Q	G	.
Template Known Secondary structure		T	T	G	G	G																													S		G	G	G																T	S										S		G	G	G	T	T									.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.
		231	.	.	.	.	.	.	.							.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.													.	.	.	260	.	.	.	.					.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure										.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.																			.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.																			.	.	.	.	.	.
Query Sequence		L	M	E	F	T	W	T	H	.	.	.	.	.	.	G	C	V	I	E	S	G	E	F	R	H	G	P	L	E	I	V	E	.	.	.	.	.	.	.	.	.	.	.	.	P	G	V	P	F	L	F	L	.	.	.	.	L	G	N	D	E	S	R	H	T	T	E	R	A	I	N	F	V	K	.	.	.	.	.	.
Query Conservation										.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.																			.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.																			.	.	.	.	.	.
Template Conservation
Template Sequence		N	M	E	S	N	G	K	Y	V	D	R	N	G	N	P	V	T	Y	Q	T	G	P	I	I	W	G	E	P	G	T	N	G	Q	H	A	F	Y	Q	L	I	H	Q	G	T	K	L	I	P	C	D	F	I	A	P	A	V	S	H	N	L	V	G	D	H	H	Q	K	L	M	S	N	F	F	A	Q	T	E	A	L	A
Template Known Secondary structure										B		T	T	S		B		S	S											T	T	T	T											S	S	S										S	S		S	S			T	T
Template Predicted Secondary structure
Template SS confidence
		354	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.
																																	283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.		.	330
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																															.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																															.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	R	T	D	N	V	I	V	I	D	Y	A	E	I	S	Q	G	L	H	P	W	L	A	P	F	L	M	F	V	P	M	E	W	L	C	Y	Y	L	S	I	Y	K	D	H	N	P	.	D	E
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																															.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.																				.
Template Conservation																																																							.	.	.	.	.
Template Sequence		F	G	K	S	A	Q	A	V	Q	A	E	L	E	K	A	G	K	S	A	A	E	I	A	A	L	V	P	F	K	V	F	E	G	N	R	P	T	N	S	I	L	V	K	Q	I	T	P	R	T	L	G	N	L	.	.	.	.	.	I	A	M	Y	E	H	K	I	F	V	Q	G	V	I	W	N	I	F	S	F	D	Q
Template Known Secondary structure				B												T	T															B												S											.	.	.	.	.															T	T			S	S
Template Predicted Secondary structure																																																							.	.	.	.	.
Template SS confidence
		434	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.						.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.
		331
Predicted Secondary structure
Query SS confidence
Query Sequence		R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		W
Template Known Secondary structure		G
Template Predicted Secondary structure
Template SS confidence
		509

No model constructed - rank, confidence too low

---

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions