Job Description P0AC00 Confidence 100.00% Date Thu Jan 5 11:16:48 GMT 2012 Rank 3 Aligned Residues 314 % Identity 26% Template c3fkjA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:putative phosphosugar isomerases; PDBTitle: crystal structure of a putative phosphosugar isomerase (stm_0572) from2 salmonella typhimurium lt2 at 2.12 a resolution Resolution 2.12 Å

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		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70		.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure																																																	.
Query SS confidence																																																	.
Query Sequence		V	L	S	H	D	V	P	L	V	H	A	I	V	E	E	M	V	K	R	D	I	D	R	I	Y	F	V	A	C	G	S	P	L	N	A	A	Q	T	A	K	H	L	A	D	R	F	S	.	D	L	Q	V	Y	A	I	S	G	W	E	F	C	D	N	T	P	Y	R	L	D	D	R	C	A	V	I	G	V	S	D	Y
Query Conservation																																																	.
Alig confidence											.	.																																					.
Template Conservation											.	.
Template Sequence		V	A	H	E	N	A	R	R	I	.	.	I	S	D	I	L	G	K	Q	N	I	E	R	V	W	F	V	G	C	G	G	S	L	T	G	F	W	P	G	K	Y	F	L	D	C	E	A	S	K	L	A	V	G	Y	I	T	S	N	E	F	V	H	A	T	P	K	A	L	G	K	N	S	V	V	I	L	A	S	Q	Q
Template Known Secondary structure											.	.						T	T	S										S	T					T	T												S	S														S			T	T		S	T	T								S	S
Template Predicted Secondary structure											.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.			.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.							.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure																																																				.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.
Query Sequence		G	K	T	E	E	V	I	K	A	L	E	L	G	R	A	C	G	A	L	T	A	A	F	T	K	R	A	D	S	P	I	T	S	A	A	E	F	S	I	D	Y	Q	A	D	C	I	W	E	I	H	.	.	.	.	.	.	L	L	L	C	Y	S	V	V	L	E	M	I	T	R	L	A	P	N	A	E	I	G	K	I
Query Conservation																																																				.	.	.	.	.	.
Alig confidence																																																				.	.	.	.	.	.
Template Conservation
Template Sequence		G	N	T	A	E	T	V	A	A	A	R	V	A	R	E	K	G	A	A	T	I	G	L	V	Y	Q	P	D	T	P	L	C	E	Y	S	D	Y	I	I	E	Y	Q	W	A	R	Y	P	E	T	V	D	P	A	Q	Q	K	A	A	Y	S	L	W	L	A	L	E	I	L	A	Q	T	E	G	Y	A	Q	Y	D	E	L
Template Known Secondary structure		S																T								S	S	T	T						T		S						B				T	T	S				G	G	G	B																	T			T	T
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	N	D	L	K	Q	L	P	N	A	L	G	H	L	V	R	T	W	E	E	K	G	R	Q	L	G	E	L	A	S	Q	W	P	M	I	Y	T	V	A	A	G	P	L	R	P	L	G	Y	K	E	G	I	V	T	L	M	E	F	T	W	T	H	G	C	V	I	E	S	G	E	F	R	H	G	P	L	E	I	V	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	S	A	F	G	R	F	S	D	V	V	H	G	A	Q	R	Q	V	Q	E	D	A	Q	R	F	A	A	E	W	K	D	E	K	V	V	Y	X	X	G	S	G	P	S	F	G	A	A	H	Q	E	S	I	C	I	L	L	E	X	Q	W	I	N	S	A	S	I	H	S	G	E	Y	F	H	G	P	F	E	I	T	E
Template Known Secondary structure							T												T												T	T		S								G	G	G											T														T	T	G	G	G	G	T	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.						.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
Predicted Secondary structure																																									.	.	.	.	.
Query SS confidence																																									.	.	.	.	.
Query Sequence		P	G	V	P	F	L	F	L	L	G	N	D	E	S	R	H	T	T	E	R	A	I	N	F	V	K	Q	R	T	D	N	V	I	V	I	D	Y	A	E	.	.	.	.	.	I	S	Q	G	L	H	P	W	L	A	P	F	L	M	F	V	P	M	E	W	L	C	Y	Y	L	S	I	Y	K	D	H	N	P	D	E	R
Query Conservation																																									.	.	.	.	.
Alig confidence																																									.	.	.	.	.
Template Conservation
Template Sequence		P	G	T	P	F	I	L	L	Q	S	S	G	R	T	R	P	L	D	D	R	A	I	R	F	I	E	R	Y	Q	G	K	L	Q	L	I	D	A	D	K	L	G	I	Q	D	L	S	T	D	V	G	E	Y	F	C	G	L	L	H	N	C	V	L	D	V	Y	N	L	A	L	A	T	A	R	N	H	P	L	T	T	R
Template Known Secondary structure		T	T									S	S	T	T														T	T								G	G	G	G	T	S	T	T	T		T	T	T	G	G	G	G																				T	T			T	T
Template Predicted Secondary structure
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
		332	.	.	.	.	.	.	.	340
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Y	Y	G	G	L	V	E	Y
Query Conservation
Alig confidence						.
Template Conservation						.
Template Sequence		R	Y	X	W	.	K	V	E	Y
Template Known Secondary structure		S	S	T	T	.	T	S
Template Predicted Secondary structure						.
Template SS confidence
		321	.	.	.		.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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