Return to main results Retrieve Phyre Job Id

Job DescriptionP0AC00
Confidence29.63%DateThu Jan 5 11:16:48 GMT 2012
Rank296Aligned Residues74
% Identity14%Templatec3eagA_
PDB info PDB header:ligaseChain: A: PDB Molecule:udp-n-acetylmuramate:l-alanyl-gamma-d-glutamyl-meso- PDBTitle: the crystal structure of udp-n-acetylmuramate:l-alanyl-gamma-d-2 glutamyl-meso-diaminopimelate ligase (mpl) from neisseria3 meningitides
Resolution2.55 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   45....50.........60.........70......... 80.........90. ........100.......
Predicted Secondary structure 







..


...............








Query SS confidence 


































. .











. . . . . . . . . . . . . . .















Query Sequence  DRIYFVACGSPLNAAQTAKHLADRFSDLQVYAISG. . WEFCDNTPYRLD. . . . . . . . . . . . . . . DRCAVIGVSDYGKTEE
Query Conservation    
   
 
 
  

      
             ..            ...............   


 

 

 
  
Alig confidence 















..






.








..











...............






...





Template Conservation 
 
 


 

 
 
 
..
  
   .
  
   
          
   
                 
 

 ...

 
  
Template Sequence  KHIHIIGIGGTFXGGL. . AAIAKEA. GFEVSGCDAKXYPPXSTQLEALGIDVYEGFDAAQLDEFKADVYVI. . . GNVAKR
Template Known Secondary structure 
S

S..T.T
SS

TTTT
S

GGGGGS


S...
TT

T
Template Predicted Secondary structure 




..
.



















...





Template SS confidence 















































































   2.......10....... ..20.... .....30.........40.........50.........60......... 70.....
 
   108.110.........120....
Predicted Secondary structure 



Query SS confidence 
















Query Sequence  VIKALELGRACGALTAA
Query Conservation   
 
   

  
   
 
Alig confidence 
















Template Conservation    
    
    
    
Template Sequence  GXDVVEAILNLGLPYIS
Template Known Secondary structure  T
TT

Template Predicted Secondary structure 






Template SS confidence 
















   76...80.........90..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions