Job Description P0AC00 Confidence 91.47% Date Thu Jan 5 11:16:48 GMT 2012 Rank 68 Aligned Residues 195 % Identity 8% Template c2v45A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:periplasmic nitrate reductase; PDBTitle: a new catalytic mechanism of periplasmic nitrate reductase2 from desulfovibrio desulfuricans atcc 27774 from3 crystallographic and epr data and based on detailed4 analysis of the sixth ligand Resolution 2.40 Å

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80																	.	.	.	.
Predicted Secondary structure																																				.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																				.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	K	V	L	S	H	D	V	P	L	V	H	A	I	V	E	E	M	V	K	R	D	I	D	R	I	Y	F	V	A	C	G	S	P	.	L	N	A	A	Q	T	A	K	H	L	A	D	R	F	S	D	L	Q	V	Y	A	I	S	G	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	F	C	D
Query Conservation																																				.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.														.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.
Template Sequence		D	E	A	L	D	L	M	A	S	R	F	R	S	S	I	D	M	Y	.	.	.	G	P	N	S	V	A	W	Y	G	S	G	Q	C	L	T	E	E	S	Y	V	A	N	K	I	F	K	G	G	F	G	T	N	N	V	D	G	N	P	R	L	C	M	A	S	A	V	G	G	Y	V	T	S	F	G	K	D	E	P	M
Template Known Secondary structure																				.	.	.		G	G	G							T	T	S														T	T	T								G	G	G	G	T	T												S	S		S		S
Template Predicted Secondary structure																				.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.				100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.			.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.			.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																			.	.																	.	.
Query SS confidence																			.	.																	.	.
Query Sequence		N	T	P	Y	R	L	D	D	R	C	A	V	I	G	V	S	D	.	.	Y	G	K	T	E	E	V	I	K	A	L	E	L	G	R	A	.	.	C	G	A	L	T	A	A	F	T	K	R	A	D	S	P	I	T	S	A	A	E	F	S	I	D	Y	Q	A	D	C	I	W	E	I	H	L	L	L	C	Y	S	V	V
Query Conservation																			.	.																	.	.
Alig confidence																			.	.																	.	.									.
Template Conservation																																															.
Template Sequence		G	T	Y	A	D	I	D	Q	A	T	C	F	F	I	I	G	S	N	T	S	E	A	H	P	V	L	F	R	R	I	A	R	R	K	Q	V	E	P	G	V	K	I	I	V	A	.	D	P	R	R	T	N	T	S	R	I	A	D	M	H	V	A	F	R	P	G	T	D	L	A	F	M	H	S	M	A	W	V	I	I
Template Known Secondary structure		S		G	G	G	G	G	T		S						S							S															T	T							.		S	B			G	G	G	G	G		S							T	T
Template Predicted Secondary structure																																															.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.		.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170														.	.	.	.	.	.	.	.	.	180	.	.	.		.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.		.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.														.																								.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.	.	.														.																								.
Query Sequence		L	E	M	I	T	R	L	A	P	N	.	.	.	.	.	.	.	.	.	.	.	.	.	A	E	I	G	K	I	K	N	D	L	K	Q	L	.	P	N	A	L	G	H	L	V	R	T	W	E	E	K	G	R	Q	L	G	E	L	A	S	.	Q	W	P	M	I	Y	T	V	A	A	G	P	L	R
Query Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.														.																								.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.														.																								.
Template Conservation
Template Sequence		N	E	E	L	D	N	P	R	F	W	Q	R	Y	V	N	F	M	D	A	E	G	K	P	S	D	F	E	G	Y	K	A	F	L	E	N	Y	R	P	E	K	V	A	E	I	C	R	V	P	V	E	Q	I	Y	G	A	A	R	A	F	A	E	S	A	A	T	M	S	L	W	C	M	G	I	N	Q
Template Known Secondary structure			T	T		S														T	T	S		B											G	G	G										T	S															S	S	S											S
Template Predicted Secondary structure
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions