Job Description P0AC00 Confidence 25.73% Date Thu Jan 5 11:16:48 GMT 2012 Rank 342 Aligned Residues 50 % Identity 22% Template c2v1dA_ PDB info PDB header:oxidoreductase/repressor Chain: A: PDB Molecule:lysine-specific histone demethylase 1; PDBTitle: structural basis of lsd1-corest selectivity in histone h32 recognition Resolution 3.10 Å

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.																		.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	V	P	L	V	H	A	I	V	E	E	M	V	K	R	D	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	R	I	Y	F	V	A	C	G	S	P	L	N	A	A	Q	T	A	K	H	L	A	D	R	F	S	D	L	Q	V	Y	A	I	S	G	W	E
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.														.
Template Conservation																																													.	.	.														.
Template Sequence		D	T	V	L	V	H	R	V	H	S	Y	L	E	R	H	G	L	I	N	F	G	I	Y	K	R	I	K	P	L	P	T	K	K	T	G	K	V	I	I	I	G	S	G	.	.	.	V	S	G	L	A	A	A	R	Q	L	Q	S	F	.	G	M	D	V	T	L	L	E	A	R	D
Template Known Secondary structure																T	T	S	S	S		S	S		B		S	S				S	S			S								S	.	.	.													T	.	T								S	S	S
Template Predicted Secondary structure																																													.	.	.														.
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.				.	.	290	.	.	.	.	.	.	.	.	.	300		.	.	.	.	.	.	.	.	.	310	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions