Return to main results Retrieve Phyre Job Id

Job DescriptionP0AC00
Confidence89.93%DateThu Jan 5 11:16:48 GMT 2012
Rank72Aligned Residues77
% Identity13%Templatec2f00A_
PDB info PDB header:ligaseChain: A: PDB Molecule:udp-n-acetylmuramate--l-alanine ligase; PDBTitle: escherichia coli murc
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   42.......50.........60.........70.........80... ......90.........100.......
Predicted Secondary structure 










..............











Query SS confidence 









































. . . . . . . . . . . . . .























Query Sequence  RDIDRIYFVACGSPLNAAQTAKHLADRFSDLQVYAISGWEFC. . . . . . . . . . . . . . DNTPYRLDDRCAVIGVSDYGKTEE
Query Conservation       
   
 
 
  

      
                 ..............           


 

 

 
  
Alig confidence 


















..






.












..............














...





Template Conservation     
 
  

 

 
 
 
..
  
   .
  
   
         
   

              
 

 ...



  
Template Sequence  RRVRHIHFVGIGGAGXGGI. . AEVLANE. GYQISGSDLAPNPVTQQLXNLGATIYFNHRPENVRDASVVVV. . . SSAISA
Template Known Secondary structure  TT

TTTSTT..T.T

SS

TT
SS

GGGGTT
S...
TT

T
Template Predicted Secondary structure 






..
.
















...





Template SS confidence 















































































   17..20.........30..... ....40.. .......50.........60.........70.........80.... .....90
 
   108.110.........120....
Predicted Secondary structure 



Query SS confidence 
















Query Sequence  VIKALELGRACGALTAA
Query Conservation   
 
   

  
   
 
Alig confidence 
















Template Conservation    
    
    
 
  
Template Sequence  DNPEIVAAHEARIPVIR
Template Known Secondary structure  T
TT

Template Predicted Secondary structure 





Template SS confidence 
















   91........100.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions