Job Description P0AC00 Confidence 100.00% Date Thu Jan 5 11:16:48 GMT 2012 Rank 1 Aligned Residues 323 % Identity 24% Template c2a3nA_ PDB info PDB header:sugar binding protein Chain: A: PDB Molecule:putative glucosamine-fructose-6-phosphate aminotransferase; PDBTitle: crystal structure of a putative glucosamine-fructose-6-phosphate2 aminotransferase (stm4540.s) from salmonella typhimurium lt2 at 1.353 a resolution Resolution 1.23 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	E	N	M	V	Q	E	V	E	K	V	L	S	H	D	V	P	L	V	H	A	I	V	E	E	M	V	K	R	D	I	D	R	I	Y	F	V	A	C	G	S	P	L	N	A	A	Q	T	A	K	H	L	A	D	R	F	S	D	L	Q	V	Y	A	I	S	G	W	E	F	C	D	N	T	P	Y	R	L	D	D	R
Query Conservation
Alig confidence															.
Template Conservation															.
Template Sequence		Q	D	E	Y	L	T	S	A	R	E	I	I	A	.	A	R	Q	K	A	E	Q	V	A	D	E	I	Y	Q	A	G	F	S	S	L	F	F	A	S	V	G	G	S	L	A	P	X	X	A	I	N	E	F	A	K	E	L	T	T	L	P	V	Y	V	E	Q	A	A	E	L	I	H	K	G	N	K	R	L	N	K	D
Template Known Secondary structure														T	.	T																	S								G	G	G																	S																T	T			T	T
Template Predicted Secondary structure															.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	A	V	I	G	V	S	D	Y	G	K	T	E	E	V	I	K	A	L	E	L	G	R	A	C	G	A	L	T	A	A	F	T	K	R	A	D	S	P	I	T	S	A	A	E	F	S	I	D	Y	Q	A	D	C	I	W	E	I	H	L	L	L	C	Y	S	V	V	L	E	M	I	T	R	L	A	P	N	A	E	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	V	V	I	T	L	S	K	S	G	D	T	K	E	S	V	A	I	A	E	W	C	K	A	Q	G	I	R	V	V	A	I	T	K	N	A	D	S	P	L	A	Q	A	A	T	W	H	I	P	X	R	H	K	N	G	V	E	Y	E	Y	X	L	L	Y	W	L	F	F	R	V	L	S	R	N	N	E	F	A	S	Y
Template Known Secondary structure									S	S	S															T	T								S		T	T	S					T		S								S	S																				T	T	S		T	T
Template Predicted Secondary structure
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	I	K	N	D	L	K	Q	L	P	N	A	L	G	H	L	V	R	T	W	E	E	K	G	R	Q	L	G	E	L	A	S	Q	W	P	M	I	Y	T	V	A	A	G	P	L	R	P	L	G	Y	K	E	G	I	V	T	L	M	E	F	T	W	T	H	G	C	V	I	E	S	G	E	F	R	H	G	P	L	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	R	F	A	S	Q	L	E	I	L	P	A	N	L	L	K	A	K	Q	K	F	D	P	Q	A	D	A	I	A	S	R	Y	H	N	S	D	Y	X	X	W	V	G	G	A	E	X	W	G	E	V	Y	L	F	S	X	C	I	L	E	E	X	Q	W	K	R	T	R	P	V	S	S	A	E	F	F	H	G	A	L	E
Template Known Secondary structure								G	G	G																								T	T		S								G	G	G											T																		T	T	T	G	G	G
Template Predicted Secondary structure
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.						.	.	.	.	300	.	.	.	.	.	.		.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
Predicted Secondary structure																																												.	.	.	.	.												.
Query SS confidence																																												.	.	.	.	.												.
Query Sequence		I	V	E	P	G	V	P	F	L	F	L	L	G	N	D	E	S	R	H	T	T	E	R	A	I	N	F	V	K	Q	R	T	D	N	V	I	V	I	D	Y	A	E	.	.	.	.	.	I	S	Q	G	L	H	P	W	L	A	P	.	F	L	M	F	V	P	M	E	W	L	C	Y	Y	L	S	I	Y	K	D	H	N
Query Conservation																																												.	.	.	.	.												.
Alig confidence																																												.	.	.	.	.												.
Template Conservation
Template Sequence		L	L	E	K	D	V	P	L	I	L	V	K	G	E	G	K	C	R	A	L	D	E	R	V	E	R	F	A	S	K	I	T	D	N	L	V	V	I	D	P	K	A	Y	A	L	D	G	I	D	D	E	F	R	W	I	X	A	P	C	V	V	S	T	L	L	V	D	R	L	A	A	H	F	E	K	Y	T	G	H	S
Template Known Secondary structure		G			T	T									S	S	T	T																S							G	G	G	S			T	T	S		G	G	G														T	T
Template Predicted Secondary structure
Template SS confidence
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
		328	.	330	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	D	E	R	R	Y	Y	G	G	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	D	I	R	R	Y	Y	R	Q	F
Template Known Secondary structure		T	T			S	S	T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		332	.	.	.	.	.	.	.	340	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions